Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 NUS1P2-201ENST00000417358 873 ntBASIC19.52■□□□□ 0.72
USP15Q9Y4E8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.52■□□□□ 0.72
USP15Q9Y4E8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.52■□□□□ 0.72
USP15Q9Y4E8 AC090164.3-201ENST00000610780 2143 ntBASIC19.52■□□□□ 0.72
USP15Q9Y4E8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
USP15Q9Y4E8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
USP15Q9Y4E8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
USP15Q9Y4E8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP15Q9Y4E8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.52■□□□□ 0.71
USP15Q9Y4E8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP15Q9Y4E8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP15Q9Y4E8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 MIR1233-2-201ENST00000408138 82 ntBASIC19.51■□□□□ 0.71
USP15Q9Y4E8 MIR1233-1-201ENST00000408722 82 ntBASIC19.51■□□□□ 0.71
USP15Q9Y4E8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 AC092865.5-201ENST00000545435 363 ntBASIC19.51■□□□□ 0.71
USP15Q9Y4E8 AC104390.1-201ENST00000555663 520 ntBASIC19.51■□□□□ 0.71
USP15Q9Y4E8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 AL592071.1-201ENST00000611956 408 ntBASIC19.51■□□□□ 0.71
USP15Q9Y4E8 AL773604.1-201ENST00000617417 272 ntBASIC19.51■□□□□ 0.71
USP15Q9Y4E8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.51■□□□□ 0.71
USP15Q9Y4E8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 AC006333.2-201ENST00000607957 2099 ntBASIC19.51■□□□□ 0.71
USP15Q9Y4E8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 NSUN5P1-202ENST00000421140 1535 ntBASIC19.51■□□□□ 0.71
USP15Q9Y4E8 NSUN5P2-203ENST00000457352 1529 ntBASIC19.51■□□□□ 0.71
USP15Q9Y4E8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP15Q9Y4E8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 KRT18P58-201ENST00000527480 1120 ntBASIC19.5■□□□□ 0.71
USP15Q9Y4E8 GPR32P1-201ENST00000601788 811 ntBASIC19.5■□□□□ 0.71
USP15Q9Y4E8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 AL161938.1-201ENST00000569833 2180 ntBASIC19.5■□□□□ 0.71
USP15Q9Y4E8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP15Q9Y4E8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms