Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 AC018712.1-201ENST00000455767 687 ntBASIC24.67■■□□□ 1.54
NINLQ9Y2I6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 RNA5SP419-201ENST00000515908 135 ntBASIC24.67■■□□□ 1.54
NINLQ9Y2I6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NINLQ9Y2I6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 KRT18P67-201ENST00000432816 1264 ntBASIC24.66■■□□□ 1.54
NINLQ9Y2I6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 AC064862.7-201ENST00000604520 867 ntBASIC24.66■■□□□ 1.54
NINLQ9Y2I6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC24.66■■□□□ 1.54
NINLQ9Y2I6 AL138781.2-201ENST00000617896 1843 ntBASIC24.66■■□□□ 1.54
NINLQ9Y2I6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 AC007967.3-201ENST00000434308 558 ntBASIC24.65■■□□□ 1.54
NINLQ9Y2I6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 AC132008.2-207ENST00000454517 770 ntBASIC24.65■■□□□ 1.54
NINLQ9Y2I6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NINLQ9Y2I6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
NINLQ9Y2I6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
NINLQ9Y2I6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC24.64■■□□□ 1.54
NINLQ9Y2I6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NINLQ9Y2I6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC24.64■■□□□ 1.54
NINLQ9Y2I6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NINLQ9Y2I6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NINLQ9Y2I6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 ABCD1P5-201ENST00000445663 754 ntBASIC24.64■■□□□ 1.53
NINLQ9Y2I6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 PENK-208ENST00000523051 772 ntTSL 5 BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NINLQ9Y2I6 AC093677.2-201ENST00000600169 1863 ntBASIC24.64■■□□□ 1.53
NINLQ9Y2I6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 WIZP1-201ENST00000531444 2299 ntBASIC24.63■■□□□ 1.53
NINLQ9Y2I6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms