Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SPG7Q9UQ90 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SPG7Q9UQ90 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SPG7Q9UQ90 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SPG7Q9UQ90 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SPG7Q9UQ90 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SPG7Q9UQ90 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SPG7Q9UQ90 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC23.58■■□□□ 1.37
SPG7Q9UQ90 MIR1233-2-201ENST00000408138 82 ntBASIC23.58■■□□□ 1.37
SPG7Q9UQ90 MIR1233-1-201ENST00000408722 82 ntBASIC23.58■■□□□ 1.37
SPG7Q9UQ90 AC092910.1-201ENST00000482027 1129 ntBASIC23.58■■□□□ 1.37
SPG7Q9UQ90 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC23.58■■□□□ 1.37
SPG7Q9UQ90 NKAPP1-205ENST00000585790 367 ntBASIC23.58■■□□□ 1.37
SPG7Q9UQ90 AP000867.4-201ENST00000641616 219 ntBASIC23.58■■□□□ 1.37
SPG7Q9UQ90 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.58■■□□□ 1.37
SPG7Q9UQ90 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC23.58■■□□□ 1.36
SPG7Q9UQ90 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SPG7Q9UQ90 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 AC098831.1-202ENST00000438821 336 ntBASIC23.57■■□□□ 1.36
SPG7Q9UQ90 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 MTDHP4-201ENST00000600287 670 ntBASIC23.57■■□□□ 1.36
SPG7Q9UQ90 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 AC027601.4-201ENST00000611259 610 ntBASIC23.57■■□□□ 1.36
SPG7Q9UQ90 AC008735.5-201ENST00000623544 497 ntBASIC23.57■■□□□ 1.36
SPG7Q9UQ90 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPG7Q9UQ90 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.56■■□□□ 1.36
SPG7Q9UQ90 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 AC007967.3-201ENST00000434308 558 ntBASIC23.56■■□□□ 1.36
SPG7Q9UQ90 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 PGAM5P1-201ENST00000518923 814 ntBASIC23.56■■□□□ 1.36
SPG7Q9UQ90 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 AC132938.6-201ENST00000623828 1655 ntBASIC23.56■■□□□ 1.36
SPG7Q9UQ90 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPG7Q9UQ90 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 INIP-202ENST00000374236 874 ntTSL 2 BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 COX5A-202ENST00000562233 441 ntTSL 3 BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 AC034105.1-201ENST00000563488 319 ntBASIC23.55■■□□□ 1.36
SPG7Q9UQ90 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 FAM197Y3-203ENST00000618346 717 ntBASIC23.55■■□□□ 1.36
SPG7Q9UQ90 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPG7Q9UQ90 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms