Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 AC093010.1-201ENST00000473625 1624 ntBASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 NKILA-202ENST00000614771 2598 ntBASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 AF186192.3-201ENST00000583427 947 ntBASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 AL163051.1-201ENST00000569214 1512 ntBASIC19.1■□□□□ 0.65
SMARCAL1Q9NZC9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SMARCAL1Q9NZC9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCAL1Q9NZC9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCAL1Q9NZC9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCAL1Q9NZC9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCAL1Q9NZC9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SMARCAL1Q9NZC9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SMARCAL1Q9NZC9 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.08■□□□□ 0.65
SMARCAL1Q9NZC9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCAL1Q9NZC9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
SMARCAL1Q9NZC9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCAL1Q9NZC9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCAL1Q9NZC9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 KRT18P55-202ENST00000578578 1546 ntBASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 AL135905.2-201ENST00000584934 1404 ntBASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCAL1Q9NZC9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms