Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXP3Q9BZS1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 MFAP1P1-201ENST00000442257 1255 ntBASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 OR6D1P-202ENST00000641007 5290 ntBASIC18.71■□□□□ 0.59
FOXP3Q9BZS1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
FOXP3Q9BZS1 AC093010.1-201ENST00000473625 1624 ntBASIC18.71■□□□□ 0.58
FOXP3Q9BZS1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 AL163051.1-201ENST00000569214 1512 ntBASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 MIR149-201ENST00000384879 89 ntBASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 AC009102.3-201ENST00000623118 1491 ntBASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXP3Q9BZS1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 SDHAP2-201ENST00000455183 2001 ntBASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 AL645608.8-201ENST00000606034 2086 ntBASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms