Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARID3AQ99856 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARID3AQ99856 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARID3AQ99856 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARID3AQ99856 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARID3AQ99856 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.62■□□□□ 0.89
ARID3AQ99856 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.62■□□□□ 0.89
ARID3AQ99856 FAM197Y1-201ENST00000421178 764 ntBASIC20.62■□□□□ 0.89
ARID3AQ99856 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.62■□□□□ 0.89
ARID3AQ99856 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.62■□□□□ 0.89
ARID3AQ99856 AC008550.1-201ENST00000511500 884 ntBASIC20.62■□□□□ 0.89
ARID3AQ99856 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.62■□□□□ 0.89
ARID3AQ99856 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.62■□□□□ 0.89
ARID3AQ99856 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.62■□□□□ 0.89
ARID3AQ99856 AC113410.3-201ENST00000623366 203 ntBASIC20.62■□□□□ 0.89
ARID3AQ99856 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARID3AQ99856 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ARID3AQ99856 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
ARID3AQ99856 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARID3AQ99856 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ARID3AQ99856 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.62■□□□□ 0.89
ARID3AQ99856 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARID3AQ99856 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARID3AQ99856 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARID3AQ99856 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.62■□□□□ 0.89
ARID3AQ99856 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARID3AQ99856 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ARID3AQ99856 KRT16P1-201ENST00000399124 1418 ntBASIC20.61■□□□□ 0.89
ARID3AQ99856 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARID3AQ99856 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARID3AQ99856 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.61■□□□□ 0.89
ARID3AQ99856 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARID3AQ99856 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARID3AQ99856 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.61■□□□□ 0.89
ARID3AQ99856 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARID3AQ99856 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ARID3AQ99856 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ARID3AQ99856 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.61■□□□□ 0.89
ARID3AQ99856 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.61■□□□□ 0.89
ARID3AQ99856 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.61■□□□□ 0.89
ARID3AQ99856 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.61■□□□□ 0.89
ARID3AQ99856 AC233702.5-201ENST00000584107 538 ntBASIC20.61■□□□□ 0.89
ARID3AQ99856 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.61■□□□□ 0.89
ARID3AQ99856 AC073195.1-201ENST00000607241 877 ntBASIC20.61■□□□□ 0.89
ARID3AQ99856 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.61■□□□□ 0.89
ARID3AQ99856 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARID3AQ99856 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.61■□□□□ 0.89
ARID3AQ99856 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.61■□□□□ 0.89
ARID3AQ99856 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ARID3AQ99856 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.61■□□□□ 0.89
ARID3AQ99856 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARID3AQ99856 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARID3AQ99856 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 AC126763.1-201ENST00000552015 2118 ntBASIC20.6■□□□□ 0.89
ARID3AQ99856 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ARID3AQ99856 AL162727.3-201ENST00000635661 2787 ntBASIC20.6■□□□□ 0.89
ARID3AQ99856 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.6■□□□□ 0.89
ARID3AQ99856 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ARID3AQ99856 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ARID3AQ99856 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.6■□□□□ 0.89
ARID3AQ99856 AC012618.2-201ENST00000428058 849 ntBASIC20.6■□□□□ 0.89
ARID3AQ99856 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.6■□□□□ 0.89
ARID3AQ99856 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
ARID3AQ99856 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 CD177P1-201ENST00000606252 935 ntBASIC20.6■□□□□ 0.89
ARID3AQ99856 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.6■□□□□ 0.89
ARID3AQ99856 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.6■□□□□ 0.89
ARID3AQ99856 AL135905.2-201ENST00000584934 1404 ntBASIC20.6■□□□□ 0.89
ARID3AQ99856 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.6■□□□□ 0.89
ARID3AQ99856 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARID3AQ99856 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARID3AQ99856 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.59■□□□□ 0.89
ARID3AQ99856 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.59■□□□□ 0.89
ARID3AQ99856 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.59■□□□□ 0.89
ARID3AQ99856 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARID3AQ99856 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARID3AQ99856 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ARID3AQ99856 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARID3AQ99856 AL049637.2-201ENST00000641778 930 ntBASIC20.59■□□□□ 0.89
ARID3AQ99856 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARID3AQ99856 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARID3AQ99856 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.59■□□□□ 0.89
ARID3AQ99856 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC20.59■□□□□ 0.89
ARID3AQ99856 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms