Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.14■□□□□ 0.34
COL21A1Q96P44 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
COL21A1Q96P44 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL21A1Q96P44 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 REXO1L9P-201ENST00000604264 2108 ntBASIC17.14■□□□□ 0.33
COL21A1Q96P44 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL21A1Q96P44 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL21A1Q96P44 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL21A1Q96P44 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL21A1Q96P44 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 BX664615.1-201ENST00000443558 458 ntBASIC17.14■□□□□ 0.33
COL21A1Q96P44 KRT18P57-201ENST00000443599 1254 ntBASIC17.14■□□□□ 0.33
COL21A1Q96P44 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL21A1Q96P44 AC139713.2-201ENST00000641328 2723 ntBASIC17.14■□□□□ 0.33
COL21A1Q96P44 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL21A1Q96P44 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL21A1Q96P44 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.14■□□□□ 0.33
COL21A1Q96P44 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL21A1Q96P44 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 KRT8P7-201ENST00000533003 1432 ntBASIC17.13■□□□□ 0.33
COL21A1Q96P44 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.13■□□□□ 0.33
COL21A1Q96P44 KRT18P23-201ENST00000435622 1283 ntBASIC17.13■□□□□ 0.33
COL21A1Q96P44 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 AC112497.1-201ENST00000624824 639 ntBASIC17.13■□□□□ 0.33
COL21A1Q96P44 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 AC099343.3-201ENST00000605834 2503 ntBASIC17.13■□□□□ 0.33
COL21A1Q96P44 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.13■□□□□ 0.33
COL21A1Q96P44 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 KRT8P50-201ENST00000562022 1438 ntBASIC17.13■□□□□ 0.33
COL21A1Q96P44 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL21A1Q96P44 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL21A1Q96P44 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL21A1Q96P44 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.12■□□□□ 0.33
COL21A1Q96P44 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
COL21A1Q96P44 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.12■□□□□ 0.33
COL21A1Q96P44 RCN1P1-201ENST00000400413 996 ntBASIC17.12■□□□□ 0.33
COL21A1Q96P44 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.12■□□□□ 0.33
COL21A1Q96P44 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.12■□□□□ 0.33
COL21A1Q96P44 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.12■□□□□ 0.33
COL21A1Q96P44 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.12■□□□□ 0.33
COL21A1Q96P44 COX11P1-201ENST00000489116 835 ntBASIC17.12■□□□□ 0.33
COL21A1Q96P44 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms