Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
CNTNAP3BQ96NU0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 PCDHAC2-203ENST00000615316 3011 ntBASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 AP005018.1-201ENST00000525475 301 ntBASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 AC093520.2-201ENST00000561830 333 ntBASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 MTDHP4-201ENST00000600287 670 ntBASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3BQ96NU0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP3BQ96NU0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP3BQ96NU0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP3BQ96NU0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP3BQ96NU0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP3BQ96NU0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTNAP3BQ96NU0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP3BQ96NU0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP3BQ96NU0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTNAP3BQ96NU0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.27■□□□□ 0.35
CNTNAP3BQ96NU0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.27■□□□□ 0.35
CNTNAP3BQ96NU0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 AP002414.1-201ENST00000391405 1147 ntBASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 AC108751.1-201ENST00000490852 363 ntBASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 AP000344.2-201ENST00000512987 629 ntBASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 RN7SL204P-201ENST00000582831 262 ntBASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CNTNAP3BQ96NU0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 FAM86GP-201ENST00000448322 971 ntBASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 PDPK2P-202ENST00000562415 1191 ntBASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CNTNAP3BQ96NU0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms