Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 AL109659.2-201ENST00000606809 1674 ntBASIC13.87□□□□□ -0.19
LINC00479Q96M42 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 AC091390.4-202ENST00000476426 537 ntBASIC13.86□□□□□ -0.19
LINC00479Q96M42 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 AC131212.4-201ENST00000623606 975 ntBASIC13.86□□□□□ -0.19
LINC00479Q96M42 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
LINC00479Q96M42 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00479Q96M42 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 KRT18P55-202ENST00000578578 1546 ntBASIC13.85□□□□□ -0.19
LINC00479Q96M42 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.85□□□□□ -0.19
LINC00479Q96M42 AL138781.1-201ENST00000566567 1274 ntBASIC13.85□□□□□ -0.19
LINC00479Q96M42 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 AL118508.1-201ENST00000613502 2345 ntBASIC13.85□□□□□ -0.19
LINC00479Q96M42 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00479Q96M42 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00479Q96M42 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00479Q96M42 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms