Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
AP3S1Q92572 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S1Q92572 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
AP3S1Q92572 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.99■□□□□ 0.15
AP3S1Q92572 KRT8P41-201ENST00000533985 1514 ntBASIC15.99■□□□□ 0.15
AP3S1Q92572 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.98■□□□□ 0.15
AP3S1Q92572 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.98■□□□□ 0.15
AP3S1Q92572 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.98■□□□□ 0.15
AP3S1Q92572 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
AP3S1Q92572 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
AP3S1Q92572 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.98■□□□□ 0.15
AP3S1Q92572 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.98■□□□□ 0.15
AP3S1Q92572 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.98■□□□□ 0.15
AP3S1Q92572 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
AP3S1Q92572 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.98■□□□□ 0.15
AP3S1Q92572 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.98■□□□□ 0.15
AP3S1Q92572 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
AP3S1Q92572 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.98■□□□□ 0.15
AP3S1Q92572 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.98■□□□□ 0.15
AP3S1Q92572 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.98■□□□□ 0.15
AP3S1Q92572 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.98■□□□□ 0.15
AP3S1Q92572 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
AP3S1Q92572 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
AP3S1Q92572 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S1Q92572 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
AP3S1Q92572 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 AL355312.1-201ENST00000407115 2176 ntBASIC15.97■□□□□ 0.15
AP3S1Q92572 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.97■□□□□ 0.15
AP3S1Q92572 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
AP3S1Q92572 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
AP3S1Q92572 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.97■□□□□ 0.15
AP3S1Q92572 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.97■□□□□ 0.15
AP3S1Q92572 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
AP3S1Q92572 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
AP3S1Q92572 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.97■□□□□ 0.15
AP3S1Q92572 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
AP3S1Q92572 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.97■□□□□ 0.15
AP3S1Q92572 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.97■□□□□ 0.15
AP3S1Q92572 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 HLA-A-209ENST00000638375 975 ntBASIC15.97■□□□□ 0.15
AP3S1Q92572 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.97■□□□□ 0.15
AP3S1Q92572 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.97■□□□□ 0.15
AP3S1Q92572 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S1Q92572 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
AP3S1Q92572 CROCCP2-202ENST00000412962 2773 ntBASIC15.97■□□□□ 0.15
AP3S1Q92572 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.97■□□□□ 0.15
AP3S1Q92572 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
AP3S1Q92572 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
AP3S1Q92572 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
AP3S1Q92572 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
AP3S1Q92572 AC133963.1-201ENST00000504166 1679 ntBASIC15.96■□□□□ 0.15
AP3S1Q92572 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 RCC2P3-201ENST00000418112 1537 ntBASIC15.96■□□□□ 0.15
AP3S1Q92572 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.96■□□□□ 0.15
AP3S1Q92572 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
AP3S1Q92572 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
AP3S1Q92572 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.96■□□□□ 0.15
AP3S1Q92572 AC016769.1-201ENST00000409132 1010 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms