Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 LINC01311-201ENST00000565162 1445 ntBASIC19.42■□□□□ 0.7
LMO3Q8TAP4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 KRT18P65-201ENST00000439811 1286 ntBASIC19.41■□□□□ 0.7
LMO3Q8TAP4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO3Q8TAP4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 RNF126P1-202ENST00000569893 925 ntBASIC19.4■□□□□ 0.7
LMO3Q8TAP4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMO3Q8TAP4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LMO3Q8TAP4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.39■□□□□ 0.7
LMO3Q8TAP4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
LMO3Q8TAP4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
LMO3Q8TAP4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 AC092647.4-201ENST00000457211 535 ntBASIC19.39■□□□□ 0.69
LMO3Q8TAP4 AP003733.1-201ENST00000491725 852 ntBASIC19.39■□□□□ 0.69
LMO3Q8TAP4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.39■□□□□ 0.69
LMO3Q8TAP4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
LMO3Q8TAP4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMO3Q8TAP4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMO3Q8TAP4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LMO3Q8TAP4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMO3Q8TAP4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms