Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC26.69■■□□□ 1.86
ABCA6Q8N139 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC26.69■■□□□ 1.86
ABCA6Q8N139 AC008667.4-201ENST00000607370 168 ntBASIC26.69■■□□□ 1.86
ABCA6Q8N139 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
ABCA6Q8N139 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA6Q8N139 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC26.69■■□□□ 1.86
ABCA6Q8N139 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC26.69■■□□□ 1.86
ABCA6Q8N139 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC26.69■■□□□ 1.86
ABCA6Q8N139 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC26.69■■□□□ 1.86
ABCA6Q8N139 STOM-202ENST00000347359 870 ntTSL 2 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ABCA6Q8N139 SYS1-203ENST00000414310 795 ntTSL 3 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 BCRP1-201ENST00000444246 691 ntBASIC26.68■■□□□ 1.86
ABCA6Q8N139 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 AC010654.1-201ENST00000615722 808 ntBASIC26.68■■□□□ 1.86
ABCA6Q8N139 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
ABCA6Q8N139 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ABCA6Q8N139 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
ABCA6Q8N139 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC26.68■■□□□ 1.86
ABCA6Q8N139 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC26.67■■□□□ 1.86
ABCA6Q8N139 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC26.67■■□□□ 1.86
ABCA6Q8N139 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
ABCA6Q8N139 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ABCA6Q8N139 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
ABCA6Q8N139 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC26.67■■□□□ 1.86
ABCA6Q8N139 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC26.67■■□□□ 1.86
ABCA6Q8N139 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC26.67■■□□□ 1.86
ABCA6Q8N139 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ABCA6Q8N139 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
ABCA6Q8N139 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ABCA6Q8N139 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
ABCA6Q8N139 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ABCA6Q8N139 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC26.67■■□□□ 1.86
ABCA6Q8N139 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC26.66■■□□□ 1.86
ABCA6Q8N139 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC26.66■■□□□ 1.86
ABCA6Q8N139 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA6Q8N139 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA6Q8N139 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
ABCA6Q8N139 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC26.66■■□□□ 1.86
ABCA6Q8N139 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA6Q8N139 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA6Q8N139 KLF4P1-201ENST00000412782 1185 ntBASIC26.66■■□□□ 1.86
ABCA6Q8N139 RNF34-208ENST00000555076 593 ntTSL 3 BASIC26.66■■□□□ 1.86
ABCA6Q8N139 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA6Q8N139 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA6Q8N139 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA6Q8N139 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA6Q8N139 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
ABCA6Q8N139 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC26.66■■□□□ 1.86
ABCA6Q8N139 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 AC073592.5-201ENST00000624854 528 ntBASIC26.65■■□□□ 1.86
ABCA6Q8N139 AL805961.1-202ENST00000641562 540 ntBASIC26.65■■□□□ 1.86
ABCA6Q8N139 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA6Q8N139 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA6Q8N139 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA6Q8N139 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA6Q8N139 AL353593.2-201ENST00000602529 1483 ntBASIC26.65■■□□□ 1.86
ABCA6Q8N139 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 BID-204ENST00000399767 2129 ntTSL 2 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 ADH5P3-201ENST00000433842 1137 ntBASIC26.65■■□□□ 1.86
ABCA6Q8N139 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 RPS15P9-201ENST00000494093 319 ntBASIC26.65■■□□□ 1.86
ABCA6Q8N139 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 IGHV3-65-201ENST00000523210 341 ntBASIC26.65■■□□□ 1.86
ABCA6Q8N139 POLD4-207ENST00000531239 584 ntTSL 2 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA6Q8N139 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA6Q8N139 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA6Q8N139 AC092364.2-202ENST00000597012 1073 ntBASIC26.65■■□□□ 1.86
ABCA6Q8N139 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA6Q8N139 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC26.65■■□□□ 1.86
ABCA6Q8N139 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC26.64■■□□□ 1.86
ABCA6Q8N139 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC26.64■■□□□ 1.85
ABCA6Q8N139 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.85
ABCA6Q8N139 SNCG-201ENST00000348795 684 ntTSL 2 BASIC26.64■■□□□ 1.85
ABCA6Q8N139 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC26.64■■□□□ 1.85
ABCA6Q8N139 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.85
ABCA6Q8N139 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC26.64■■□□□ 1.85
ABCA6Q8N139 COX20P2-201ENST00000452636 358 ntBASIC26.64■■□□□ 1.85
ABCA6Q8N139 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC26.64■■□□□ 1.85
ABCA6Q8N139 AC239800.4-201ENST00000603712 296 ntBASIC26.64■■□□□ 1.85
ABCA6Q8N139 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
ABCA6Q8N139 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms