Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 MIR3180-5-201ENST00000583743 153 ntBASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 AC034236.2-201ENST00000606662 1610 ntBASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF1Q7Z6J0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 AC018470.1-201ENST00000624790 3129 ntBASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 AC112497.1-201ENST00000624824 639 ntBASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.74■□□□□ 0.91
SH3RF1Q7Z6J0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 KRT18P13-201ENST00000400056 1290 ntBASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 AC099336.1-202ENST00000602961 463 ntBASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.73■□□□□ 0.91
SH3RF1Q7Z6J0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 AC117500.6-201ENST00000624871 588 ntBASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 AC008764.6-201ENST00000595909 2069 ntBASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF1Q7Z6J0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms