Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC149Q6ZUS6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC149Q6ZUS6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 HNRNPDP1-201ENST00000439535 754 ntBASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 AP001269.4-201ENST00000609611 512 ntBASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC149Q6ZUS6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC149Q6ZUS6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 AC112698.1-201ENST00000510299 916 ntBASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC149Q6ZUS6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms