Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDH1Q08174 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 AL023973.1-201ENST00000624619 620 ntBASIC17.5■□□□□ 0.39
PCDH1Q08174 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH1Q08174 AC132938.6-201ENST00000623828 1655 ntBASIC17.5■□□□□ 0.39
PCDH1Q08174 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH1Q08174 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH1Q08174 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDH1Q08174 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH1Q08174 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PCDH1Q08174 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PCDH1Q08174 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH1Q08174 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH1Q08174 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH1Q08174 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH1Q08174 AC099343.3-201ENST00000605834 2503 ntBASIC17.49■□□□□ 0.39
PCDH1Q08174 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH1Q08174 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
PCDH1Q08174 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH1Q08174 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.49■□□□□ 0.39
PCDH1Q08174 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH1Q08174 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH1Q08174 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH1Q08174 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH1Q08174 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH1Q08174 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH1Q08174 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
PCDH1Q08174 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.49■□□□□ 0.39
PCDH1Q08174 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDH1Q08174 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDH1Q08174 LINC01023-201ENST00000606054 436 ntBASIC17.49■□□□□ 0.39
PCDH1Q08174 AC011558.1-201ENST00000623459 338 ntBASIC17.49■□□□□ 0.39
PCDH1Q08174 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH1Q08174 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH1Q08174 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDH1Q08174 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDH1Q08174 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDH1Q08174 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDH1Q08174 AP000997.3-201ENST00000623333 2250 ntBASIC17.49■□□□□ 0.39
PCDH1Q08174 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH1Q08174 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH1Q08174 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
PCDH1Q08174 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH1Q08174 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDH1Q08174 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDH1Q08174 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH1Q08174 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH1Q08174 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH1Q08174 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH1Q08174 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PCDH1Q08174 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH1Q08174 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH1Q08174 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH1Q08174 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.48■□□□□ 0.39
PCDH1Q08174 ATP5G1P1-201ENST00000448724 379 ntBASIC17.48■□□□□ 0.39
PCDH1Q08174 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH1Q08174 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDH1Q08174 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH1Q08174 AC079602.3-201ENST00000623931 403 ntBASIC17.48■□□□□ 0.39
PCDH1Q08174 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH1Q08174 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH1Q08174 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PCDH1Q08174 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH1Q08174 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH1Q08174 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH1Q08174 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH1Q08174 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
PCDH1Q08174 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH1Q08174 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH1Q08174 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH1Q08174 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH1Q08174 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH1Q08174 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH1Q08174 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH1Q08174 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDH1Q08174 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH1Q08174 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH1Q08174 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH1Q08174 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDH1Q08174 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDH1Q08174 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH1Q08174 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDH1Q08174 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PCDH1Q08174 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDH1Q08174 YBX1P2-201ENST00000489612 999 ntBASIC17.47■□□□□ 0.39
PCDH1Q08174 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDH1Q08174 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDH1Q08174 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
PCDH1Q08174 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH1Q08174 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDH1Q08174 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH1Q08174 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDH1Q08174 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH1Q08174 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms