Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 AC005332.3-201ENST00000589904 676 ntBASIC20.71■□□□□ 0.91
CHMP4BP1P59074 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP4BP1P59074 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.91
CHMP4BP1P59074 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 TPSP2-201ENST00000561760 610 ntBASIC20.7■□□□□ 0.9
CHMP4BP1P59074 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 AC138894.3-201ENST00000603787 634 ntBASIC20.7■□□□□ 0.9
CHMP4BP1P59074 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP4BP1P59074 LINC00167-201ENST00000530583 1419 ntBASIC20.7■□□□□ 0.9
CHMP4BP1P59074 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 AC034236.2-201ENST00000606662 1610 ntBASIC20.69■□□□□ 0.9
CHMP4BP1P59074 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 EMBP1-201ENST00000458200 901 ntBASIC20.69■□□□□ 0.9
CHMP4BP1P59074 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP4BP1P59074 KRT8P32-201ENST00000512863 1461 ntBASIC20.69■□□□□ 0.9
CHMP4BP1P59074 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 AC091304.2-201ENST00000564639 760 ntBASIC20.68■□□□□ 0.9
CHMP4BP1P59074 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHMP4BP1P59074 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms