Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.06■□□□□ 0.32
RFX3P48380 KRT18P41-201ENST00000518924 1277 ntBASIC17.06■□□□□ 0.32
RFX3P48380 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RFX3P48380 AL023973.1-201ENST00000624619 620 ntBASIC17.06■□□□□ 0.32
RFX3P48380 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.06■□□□□ 0.32
RFX3P48380 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX3P48380 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX3P48380 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX3P48380 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX3P48380 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RFX3P48380 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.06■□□□□ 0.32
RFX3P48380 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX3P48380 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX3P48380 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFX3P48380 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX3P48380 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.05■□□□□ 0.32
RFX3P48380 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 HOXB1-202ENST00000577092 1414 ntBASIC17.05■□□□□ 0.32
RFX3P48380 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.05■□□□□ 0.32
RFX3P48380 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.05■□□□□ 0.32
RFX3P48380 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.05■□□□□ 0.32
RFX3P48380 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.05■□□□□ 0.32
RFX3P48380 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.05■□□□□ 0.32
RFX3P48380 AC140113.3-201ENST00000605663 199 ntBASIC17.05■□□□□ 0.32
RFX3P48380 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.05■□□□□ 0.32
RFX3P48380 AC097493.4-201ENST00000641197 219 ntBASIC17.05■□□□□ 0.32
RFX3P48380 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RFX3P48380 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX3P48380 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.05■□□□□ 0.32
RFX3P48380 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.05■□□□□ 0.32
RFX3P48380 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.05■□□□□ 0.32
RFX3P48380 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX3P48380 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.05■□□□□ 0.32
RFX3P48380 KRT8P7-201ENST00000533003 1432 ntBASIC17.04■□□□□ 0.32
RFX3P48380 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.04■□□□□ 0.32
RFX3P48380 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX3P48380 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RFX3P48380 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 LTB4R2-202ENST00000528054 3092 ntBASIC17.04■□□□□ 0.32
RFX3P48380 AC135776.1-201ENST00000319817 2481 ntBASIC17.04■□□□□ 0.32
RFX3P48380 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RFX3P48380 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.04■□□□□ 0.32
RFX3P48380 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RFX3P48380 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX3P48380 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RFX3P48380 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX3P48380 AC005521.1-201ENST00000393351 872 ntBASIC17.04■□□□□ 0.32
RFX3P48380 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX3P48380 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX3P48380 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.04■□□□□ 0.32
RFX3P48380 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX3P48380 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RFX3P48380 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 AL163051.1-201ENST00000569214 1512 ntBASIC17.04■□□□□ 0.32
RFX3P48380 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.04■□□□□ 0.32
RFX3P48380 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX3P48380 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX3P48380 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms