Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.36■□□□□ 0.53
HADHAP40939 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HADHAP40939 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
HADHAP40939 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HADHAP40939 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HADHAP40939 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.36■□□□□ 0.53
HADHAP40939 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HADHAP40939 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.36■□□□□ 0.53
HADHAP40939 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HADHAP40939 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.36■□□□□ 0.53
HADHAP40939 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.36■□□□□ 0.53
HADHAP40939 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HADHAP40939 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.36■□□□□ 0.53
HADHAP40939 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HADHAP40939 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.36■□□□□ 0.53
HADHAP40939 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HADHAP40939 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HADHAP40939 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.36■□□□□ 0.53
HADHAP40939 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.36■□□□□ 0.53
HADHAP40939 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HADHAP40939 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.36■□□□□ 0.53
HADHAP40939 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.36■□□□□ 0.53
HADHAP40939 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
HADHAP40939 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HADHAP40939 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HADHAP40939 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.35■□□□□ 0.53
HADHAP40939 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HADHAP40939 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
HADHAP40939 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.35■□□□□ 0.53
HADHAP40939 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HADHAP40939 RCN1P1-201ENST00000400413 996 ntBASIC18.35■□□□□ 0.53
HADHAP40939 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.35■□□□□ 0.53
HADHAP40939 REXO1L9P-201ENST00000604264 2108 ntBASIC18.35■□□□□ 0.53
HADHAP40939 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
HADHAP40939 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.35■□□□□ 0.53
HADHAP40939 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHAP40939 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.34■□□□□ 0.53
HADHAP40939 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.34■□□□□ 0.53
HADHAP40939 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HADHAP40939 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.34■□□□□ 0.53
HADHAP40939 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
HADHAP40939 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HADHAP40939 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.34■□□□□ 0.53
HADHAP40939 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.34■□□□□ 0.53
HADHAP40939 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
HADHAP40939 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.34■□□□□ 0.53
HADHAP40939 GCSHP2-201ENST00000560971 527 ntBASIC18.34■□□□□ 0.53
HADHAP40939 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.34■□□□□ 0.53
HADHAP40939 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.34■□□□□ 0.53
HADHAP40939 AC010331.1-201ENST00000611423 582 ntBASIC18.34■□□□□ 0.53
HADHAP40939 AL023973.1-201ENST00000624619 620 ntBASIC18.34■□□□□ 0.53
HADHAP40939 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.34■□□□□ 0.53
HADHAP40939 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHAP40939 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HADHAP40939 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
HADHAP40939 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HADHAP40939 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
HADHAP40939 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.33■□□□□ 0.53
HADHAP40939 AC067852.2-201ENST00000590513 2313 ntBASIC18.33■□□□□ 0.53
HADHAP40939 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HADHAP40939 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HADHAP40939 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.33■□□□□ 0.52
HADHAP40939 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HADHAP40939 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.33■□□□□ 0.52
HADHAP40939 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HADHAP40939 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HADHAP40939 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HADHAP40939 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HADHAP40939 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HADHAP40939 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HADHAP40939 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
HADHAP40939 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HADHAP40939 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HADHAP40939 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HADHAP40939 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HADHAP40939 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms