Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.8■□□□□ 0.28
PRKCAP17252 AL513477.1-201ENST00000602865 2407 ntBASIC16.8■□□□□ 0.28
PRKCAP17252 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 AC067852.2-201ENST00000590513 2313 ntBASIC16.8■□□□□ 0.28
PRKCAP17252 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.8■□□□□ 0.28
PRKCAP17252 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.8■□□□□ 0.28
PRKCAP17252 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.8■□□□□ 0.28
PRKCAP17252 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PRKCAP17252 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.8■□□□□ 0.28
PRKCAP17252 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PRKCAP17252 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.8■□□□□ 0.28
PRKCAP17252 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.8■□□□□ 0.28
PRKCAP17252 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PRKCAP17252 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.8■□□□□ 0.28
PRKCAP17252 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.8■□□□□ 0.28
PRKCAP17252 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.8■□□□□ 0.28
PRKCAP17252 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.8■□□□□ 0.28
PRKCAP17252 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PRKCAP17252 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.8■□□□□ 0.28
PRKCAP17252 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.8■□□□□ 0.28
PRKCAP17252 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.8■□□□□ 0.28
PRKCAP17252 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRKCAP17252 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.79■□□□□ 0.28
PRKCAP17252 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PRKCAP17252 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PRKCAP17252 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.79■□□□□ 0.28
PRKCAP17252 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.79■□□□□ 0.28
PRKCAP17252 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PRKCAP17252 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.79■□□□□ 0.28
PRKCAP17252 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PRKCAP17252 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
PRKCAP17252 AC104390.1-201ENST00000555663 520 ntBASIC16.79■□□□□ 0.28
PRKCAP17252 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.79■□□□□ 0.28
PRKCAP17252 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.79■□□□□ 0.28
PRKCAP17252 AC024243.1-201ENST00000609234 778 ntBASIC16.79■□□□□ 0.28
PRKCAP17252 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PRKCAP17252 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.79■□□□□ 0.28
PRKCAP17252 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PRKCAP17252 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.79■□□□□ 0.28
PRKCAP17252 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PRKCAP17252 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.79■□□□□ 0.28
PRKCAP17252 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.79■□□□□ 0.28
PRKCAP17252 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 OR6D1P-202ENST00000641007 5290 ntBASIC16.79■□□□□ 0.28
PRKCAP17252 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PRKCAP17252 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRKCAP17252 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PRKCAP17252 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.78■□□□□ 0.28
PRKCAP17252 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PRKCAP17252 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PRKCAP17252 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PRKCAP17252 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 PCDHA12-202ENST00000613593 2588 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms