Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.67□□□□□ -0.22
LTAP01374 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.67□□□□□ -0.22
LTAP01374 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 AC098934.4-201ENST00000564127 592 ntBASIC13.67□□□□□ -0.22
LTAP01374 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.67□□□□□ -0.22
LTAP01374 AL138781.1-201ENST00000566567 1274 ntBASIC13.67□□□□□ -0.22
LTAP01374 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
LTAP01374 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
LTAP01374 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LTAP01374 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.67□□□□□ -0.22
LTAP01374 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.67□□□□□ -0.22
LTAP01374 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
LTAP01374 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LTAP01374 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.66□□□□□ -0.22
LTAP01374 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LTAP01374 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.66□□□□□ -0.22
LTAP01374 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.66□□□□□ -0.22
LTAP01374 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.66□□□□□ -0.22
LTAP01374 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 AL023284.2-201ENST00000405850 579 ntBASIC13.66□□□□□ -0.22
LTAP01374 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.66□□□□□ -0.22
LTAP01374 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.66□□□□□ -0.22
LTAP01374 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
LTAP01374 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.66□□□□□ -0.22
LTAP01374 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.66□□□□□ -0.22
LTAP01374 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.66□□□□□ -0.22
LTAP01374 AC008622.2-201ENST00000617006 1229 ntBASIC13.66□□□□□ -0.22
LTAP01374 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.66□□□□□ -0.22
LTAP01374 AC099343.3-201ENST00000605834 2503 ntBASIC13.66□□□□□ -0.22
LTAP01374 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTAP01374 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.65□□□□□ -0.22
LTAP01374 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LTAP01374 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
LTAP01374 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.65□□□□□ -0.22
LTAP01374 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.65□□□□□ -0.22
LTAP01374 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.65□□□□□ -0.22
LTAP01374 UNC93B5-201ENST00000530315 699 ntBASIC13.65□□□□□ -0.22
LTAP01374 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.65□□□□□ -0.22
LTAP01374 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.65□□□□□ -0.22
LTAP01374 AL137784.2-201ENST00000607332 1000 ntBASIC13.65□□□□□ -0.22
LTAP01374 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.65□□□□□ -0.22
LTAP01374 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.65□□□□□ -0.22
LTAP01374 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
LTAP01374 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LTAP01374 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.65□□□□□ -0.22
LTAP01374 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
LTAP01374 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
LTAP01374 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.65□□□□□ -0.22
LTAP01374 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LTAP01374 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LTAP01374 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms