Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
TRIM3O75382 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM3O75382 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM3O75382 AL121956.5-201ENST00000625261 221 ntBASIC16.93■□□□□ 0.3
TRIM3O75382 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM3O75382 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM3O75382 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM3O75382 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM3O75382 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM3O75382 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRIM3O75382 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM3O75382 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM3O75382 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM3O75382 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM3O75382 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM3O75382 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
TRIM3O75382 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM3O75382 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM3O75382 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM3O75382 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM3O75382 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 KRT18P41-201ENST00000518924 1277 ntBASIC16.92■□□□□ 0.3
TRIM3O75382 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM3O75382 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRIM3O75382 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM3O75382 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM3O75382 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM3O75382 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM3O75382 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM3O75382 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM3O75382 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRIM3O75382 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 WIZP1-201ENST00000531444 2299 ntBASIC16.91■□□□□ 0.3
TRIM3O75382 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM3O75382 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM3O75382 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM3O75382 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TRIM3O75382 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM3O75382 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM3O75382 MIR3180-4-201ENST00000582223 153 ntBASIC16.91■□□□□ 0.3
TRIM3O75382 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.91■□□□□ 0.3
TRIM3O75382 AC010240.3-201ENST00000607688 395 ntBASIC16.91■□□□□ 0.3
TRIM3O75382 AC083849.1-201ENST00000615227 514 ntBASIC16.91■□□□□ 0.3
TRIM3O75382 AL157888.1-201ENST00000631930 593 ntBASIC16.91■□□□□ 0.3
TRIM3O75382 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM3O75382 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM3O75382 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRIM3O75382 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM3O75382 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM3O75382 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.91■□□□□ 0.3
TRIM3O75382 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM3O75382 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM3O75382 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM3O75382 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM3O75382 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM3O75382 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 LINC01311-201ENST00000565162 1445 ntBASIC16.9■□□□□ 0.3
TRIM3O75382 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM3O75382 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM3O75382 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM3O75382 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms