Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.51■□□□□ 0.39
GFRA3O60609 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.51■□□□□ 0.39
GFRA3O60609 AL390754.1-201ENST00000619088 582 ntBASIC17.51■□□□□ 0.39
GFRA3O60609 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.51■□□□□ 0.39
GFRA3O60609 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.51■□□□□ 0.39
GFRA3O60609 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.51■□□□□ 0.39
GFRA3O60609 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.51■□□□□ 0.39
GFRA3O60609 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.51■□□□□ 0.39
GFRA3O60609 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.51■□□□□ 0.39
GFRA3O60609 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.51■□□□□ 0.39
GFRA3O60609 KRT8P47-201ENST00000604727 1398 ntBASIC17.51■□□□□ 0.39
GFRA3O60609 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA3O60609 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GFRA3O60609 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
GFRA3O60609 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA3O60609 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.5■□□□□ 0.39
GFRA3O60609 SIGLEC16-201ENST00000599858 1437 ntBASIC17.5■□□□□ 0.39
GFRA3O60609 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA3O60609 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.5■□□□□ 0.39
GFRA3O60609 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA3O60609 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA3O60609 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.5■□□□□ 0.39
GFRA3O60609 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA3O60609 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA3O60609 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA3O60609 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA3O60609 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.5■□□□□ 0.39
GFRA3O60609 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.5■□□□□ 0.39
GFRA3O60609 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA3O60609 SPDYE22P-201ENST00000582158 798 ntBASIC17.5■□□□□ 0.39
GFRA3O60609 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.5■□□□□ 0.39
GFRA3O60609 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA3O60609 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA3O60609 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
GFRA3O60609 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA3O60609 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.5■□□□□ 0.39
GFRA3O60609 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GFRA3O60609 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA3O60609 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA3O60609 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA3O60609 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.49■□□□□ 0.39
GFRA3O60609 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.49■□□□□ 0.39
GFRA3O60609 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA3O60609 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.49■□□□□ 0.39
GFRA3O60609 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
GFRA3O60609 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GFRA3O60609 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GFRA3O60609 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA3O60609 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA3O60609 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA3O60609 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
GFRA3O60609 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA3O60609 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.49■□□□□ 0.39
GFRA3O60609 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GFRA3O60609 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.49■□□□□ 0.39
GFRA3O60609 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.49■□□□□ 0.39
GFRA3O60609 TIMM8BP1-201ENST00000452384 211 ntBASIC17.49■□□□□ 0.39
GFRA3O60609 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GFRA3O60609 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.49■□□□□ 0.39
GFRA3O60609 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.49■□□□□ 0.39
GFRA3O60609 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GFRA3O60609 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.49■□□□□ 0.39
GFRA3O60609 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.49■□□□□ 0.39
GFRA3O60609 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.49■□□□□ 0.39
GFRA3O60609 AC068137.2-201ENST00000605408 478 ntBASIC17.49■□□□□ 0.39
GFRA3O60609 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA3O60609 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA3O60609 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA3O60609 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
GFRA3O60609 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA3O60609 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA3O60609 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GFRA3O60609 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA3O60609 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA3O60609 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA3O60609 Z98044.1-201ENST00000632503 1764 ntBASIC17.48■□□□□ 0.39
GFRA3O60609 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.48■□□□□ 0.39
GFRA3O60609 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA3O60609 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA3O60609 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA3O60609 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA3O60609 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
GFRA3O60609 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA3O60609 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA3O60609 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.48■□□□□ 0.39
GFRA3O60609 U91328.1-201ENST00000437528 223 ntBASIC17.48■□□□□ 0.39
GFRA3O60609 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA3O60609 AC125807.1-201ENST00000483097 614 ntBASIC17.48■□□□□ 0.39
GFRA3O60609 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA3O60609 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.48■□□□□ 0.39
GFRA3O60609 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.48■□□□□ 0.39
GFRA3O60609 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA3O60609 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA3O60609 FO538757.1-201ENST00000623083 1397 ntBASIC17.48■□□□□ 0.39
GFRA3O60609 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA3O60609 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
GFRA3O60609 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms