Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RIPK2O43353 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
RIPK2O43353 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.43■□□□□ 0.54
RIPK2O43353 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RIPK2O43353 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RIPK2O43353 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.43■□□□□ 0.54
RIPK2O43353 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RIPK2O43353 MESTP1-201ENST00000404287 994 ntBASIC18.43■□□□□ 0.54
RIPK2O43353 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RIPK2O43353 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.43■□□□□ 0.54
RIPK2O43353 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.43■□□□□ 0.54
RIPK2O43353 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RIPK2O43353 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RIPK2O43353 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RIPK2O43353 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.43■□□□□ 0.54
RIPK2O43353 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RIPK2O43353 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RIPK2O43353 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.42■□□□□ 0.54
RIPK2O43353 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.42■□□□□ 0.54
RIPK2O43353 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.42■□□□□ 0.54
RIPK2O43353 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.42■□□□□ 0.54
RIPK2O43353 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
RIPK2O43353 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RIPK2O43353 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RIPK2O43353 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RIPK2O43353 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RIPK2O43353 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RIPK2O43353 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RIPK2O43353 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.42■□□□□ 0.54
RIPK2O43353 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
RIPK2O43353 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RIPK2O43353 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.42■□□□□ 0.54
RIPK2O43353 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RIPK2O43353 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.42■□□□□ 0.54
RIPK2O43353 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.42■□□□□ 0.54
RIPK2O43353 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
RIPK2O43353 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RIPK2O43353 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RIPK2O43353 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RIPK2O43353 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RIPK2O43353 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.42■□□□□ 0.54
RIPK2O43353 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RIPK2O43353 AC096733.2-201ENST00000609937 1394 ntBASIC18.42■□□□□ 0.54
RIPK2O43353 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIPK2O43353 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
RIPK2O43353 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RIPK2O43353 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIPK2O43353 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIPK2O43353 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RIPK2O43353 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIPK2O43353 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.41■□□□□ 0.54
RIPK2O43353 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIPK2O43353 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIPK2O43353 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIPK2O43353 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RIPK2O43353 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RIPK2O43353 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.41■□□□□ 0.54
RIPK2O43353 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RIPK2O43353 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.41■□□□□ 0.54
RIPK2O43353 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RIPK2O43353 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIPK2O43353 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.41■□□□□ 0.54
RIPK2O43353 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.41■□□□□ 0.54
RIPK2O43353 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.41■□□□□ 0.54
RIPK2O43353 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RIPK2O43353 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.41■□□□□ 0.54
RIPK2O43353 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIPK2O43353 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIPK2O43353 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.4■□□□□ 0.54
RIPK2O43353 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIPK2O43353 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIPK2O43353 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RIPK2O43353 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIPK2O43353 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RIPK2O43353 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.4■□□□□ 0.54
RIPK2O43353 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RIPK2O43353 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.4■□□□□ 0.54
RIPK2O43353 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.4■□□□□ 0.54
RIPK2O43353 AC100803.2-201ENST00000562459 1963 ntBASIC18.4■□□□□ 0.54
RIPK2O43353 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RIPK2O43353 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RIPK2O43353 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
RIPK2O43353 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIPK2O43353 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.4■□□□□ 0.54
RIPK2O43353 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RIPK2O43353 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RIPK2O43353 HOXB1-202ENST00000577092 1414 ntBASIC18.4■□□□□ 0.54
RIPK2O43353 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIPK2O43353 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RIPK2O43353 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.39■□□□□ 0.54
RIPK2O43353 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RIPK2O43353 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
RIPK2O43353 AL024508.2-201ENST00000607749 1894 ntBASIC18.39■□□□□ 0.54
RIPK2O43353 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RIPK2O43353 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RIPK2O43353 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RIPK2O43353 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
RIPK2O43353 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RIPK2O43353 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.39■□□□□ 0.53
RIPK2O43353 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms