Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00862A6NCI5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 AC005915.1-201ENST00000624912 2018 ntBASIC14.71□□□□□ -0.05
LINC00862A6NCI5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 AC239859.2-201ENST00000444165 318 ntBASIC14.71□□□□□ -0.05
LINC00862A6NCI5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 AC133561.4-201ENST00000566112 224 ntBASIC14.71□□□□□ -0.05
LINC00862A6NCI5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00862A6NCI5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00862A6NCI5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00862A6NCI5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00862A6NCI5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00862A6NCI5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00862A6NCI5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00862A6NCI5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00862A6NCI5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
LINC00862A6NCI5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
LINC00862A6NCI5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 AC116351.2-201ENST00000606540 1585 ntBASIC14.7□□□□□ -0.06
LINC00862A6NCI5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 SRD5A1P1-201ENST00000442297 786 ntBASIC14.7□□□□□ -0.06
LINC00862A6NCI5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00862A6NCI5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms