Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 AC007967.3-201ENST00000434308 558 ntBASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC163A0A0D9SF12 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 AC254562.1-201ENST00000417586 456 ntBASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 AC108751.1-201ENST00000490852 363 ntBASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 MIR3197-201ENST00000582241 73 ntBASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 AD001527.2-201ENST00000622994 785 ntBASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC163A0A0D9SF12 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 AC096633.1-201ENST00000422446 749 ntBASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 BX005266.1-201ENST00000473402 457 ntBASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 AL589182.2-201ENST00000619332 1049 ntBASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms