Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 SOX15-203ENST00000570788 1093 ntBASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 PRSS44-201ENST00000515154 1146 ntBASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 AC008687.6-201ENST00000596318 630 ntBASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 UBALD1-205ENST00000590891 2641 ntBASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RCL1Q9Y2P8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 AL121761.2-201ENST00000598007 1648 ntBASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 AL118508.1-201ENST00000613502 2345 ntBASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 MIR663A-201ENST00000385250 93 ntBASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RCL1Q9Y2P8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms