Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 AC112698.1-201ENST00000510299 916 ntBASIC19.13■□□□□ 0.65
CDH9Q9ULB4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 AC099336.1-202ENST00000602961 463 ntBASIC19.13■□□□□ 0.65
CDH9Q9ULB4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH9Q9ULB4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 AL096828.2-201ENST00000567259 1965 ntBASIC19.12■□□□□ 0.65
CDH9Q9ULB4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 MINOS1P3-201ENST00000457048 203 ntBASIC19.12■□□□□ 0.65
CDH9Q9ULB4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 FOSL1P1-201ENST00000511041 816 ntBASIC19.12■□□□□ 0.65
CDH9Q9ULB4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 DUTP2-201ENST00000519164 463 ntBASIC19.12■□□□□ 0.65
CDH9Q9ULB4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 AL121772.3-201ENST00000610840 674 ntBASIC19.12■□□□□ 0.65
CDH9Q9ULB4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 AC135776.1-201ENST00000319817 2481 ntBASIC19.12■□□□□ 0.65
CDH9Q9ULB4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH9Q9ULB4 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 TSPY19P-201ENST00000418461 509 ntBASIC19.11■□□□□ 0.65
CDH9Q9ULB4 TSPY18P-201ENST00000441642 509 ntBASIC19.11■□□□□ 0.65
CDH9Q9ULB4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 AC005336.2-201ENST00000593183 939 ntBASIC19.11■□□□□ 0.65
CDH9Q9ULB4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH9Q9ULB4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms