Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC10Q9NYD6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 FAM220CP-201ENST00000395253 831 ntBASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 KRT18P13-201ENST00000400056 1290 ntBASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 PMS2P7-201ENST00000506558 1336 ntBASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXC10Q9NYD6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
HOXC10Q9NYD6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 TERC-201ENST00000602385 541 ntBASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 AL139288.1-201ENST00000623748 933 ntBASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HOXC10Q9NYD6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 HLA-J-201ENST00000462773 1622 ntBASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 RPS2P1-201ENST00000434010 821 ntBASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 POLD2P1-201ENST00000511220 997 ntBASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 OR7E14P-202ENST00000530490 1290 ntBASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 AC139530.3-201ENST00000620344 690 ntBASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 AP000867.4-201ENST00000641616 219 ntBASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC10Q9NYD6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms