Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.77■□□□□ 0.27
CHD8Q9HCK8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CHD8Q9HCK8 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.77■□□□□ 0.27
CHD8Q9HCK8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHD8Q9HCK8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 KRT18P41-201ENST00000518924 1277 ntBASIC16.76■□□□□ 0.27
CHD8Q9HCK8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 AL033527.4-201ENST00000641026 673 ntBASIC16.76■□□□□ 0.27
CHD8Q9HCK8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 AC140878.1-201ENST00000565277 250 ntBASIC16.76■□□□□ 0.27
CHD8Q9HCK8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CHD8Q9HCK8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 LINC00602-201ENST00000629776 2065 ntBASIC16.75■□□□□ 0.27
CHD8Q9HCK8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 Z98044.1-201ENST00000632503 1764 ntBASIC16.75■□□□□ 0.27
CHD8Q9HCK8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 PIN1P1-201ENST00000412108 996 ntBASIC16.75■□□□□ 0.27
CHD8Q9HCK8 KLF2P3-201ENST00000451977 1087 ntBASIC16.75■□□□□ 0.27
CHD8Q9HCK8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.75■□□□□ 0.27
CHD8Q9HCK8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 IGHV3-65-201ENST00000523210 341 ntBASIC16.74■□□□□ 0.27
CHD8Q9HCK8 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CHD8Q9HCK8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHD8Q9HCK8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.73■□□□□ 0.27
CHD8Q9HCK8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHD8Q9HCK8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms