Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 AC090616.6-201ENST00000582640 721 ntBASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A4Q9HBG4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
ATP6V0A4Q9HBG4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.14■□□□□ 0.82
ATP6V0A4Q9HBG4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.14■□□□□ 0.82
ATP6V0A4Q9HBG4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 AC004870.1-201ENST00000315132 882 ntBASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 AL845331.1-201ENST00000424978 1190 ntBASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 DRAXINP1-201ENST00000437611 948 ntBASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.14■□□□□ 0.81
ATP6V0A4Q9HBG4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 LINC00265-3P-201ENST00000447588 903 ntBASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 GUSBP12-201ENST00000513727 720 ntBASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 AP000867.3-201ENST00000524675 377 ntBASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 TPSP2-201ENST00000561760 610 ntBASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 IGHV3-41-201ENST00000613121 348 ntBASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP6V0A4Q9HBG4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 AL592071.1-201ENST00000611956 408 ntBASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 AC020916.1-201ENST00000587762 1774 ntBASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 LTB4R2-202ENST00000528054 3092 ntBASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP6V0A4Q9HBG4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms