Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 RBPMS2P1-201ENST00000437762 623 ntBASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 SPTLC1P1-201ENST00000447199 261 ntBASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 SPDYE11-202ENST00000450699 704 ntBASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 SPDYE9P-201ENST00000570642 692 ntBASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 SPDYE10P-202ENST00000612005 668 ntBASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 SPDYE8P-202ENST00000612377 668 ntBASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL25A1Q9BXS0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 AC092580.3-201ENST00000430932 139 ntBASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 AC106886.1-201ENST00000568660 600 ntBASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL25A1Q9BXS0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 AC241585.1-201ENST00000433527 519 ntBASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL25A1Q9BXS0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.21■□□□□ 0.5
COL25A1Q9BXS0 KRT8P32-201ENST00000512863 1461 ntBASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 AL355306.1-201ENST00000415580 579 ntBASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.2■□□□□ 0.5
COL25A1Q9BXS0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL25A1Q9BXS0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL25A1Q9BXS0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL25A1Q9BXS0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL25A1Q9BXS0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms