Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 AC132938.6-201ENST00000623828 1655 ntBASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 PCDHA12-202ENST00000613593 2588 ntBASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 PRORSD1P-201ENST00000295112 541 ntBASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 KRT18P29-201ENST00000397031 1267 ntBASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 AC112497.1-201ENST00000624824 639 ntBASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 AL355312.1-201ENST00000407115 2176 ntBASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 AL023806.1-201ENST00000603994 1649 ntBASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.06■□□□□ 0.32
CPPED1Q9BRF8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 HCG11-201ENST00000411553 5696 ntBASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 AL355355.2-201ENST00000442321 338 ntBASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 TSPY17P-201ENST00000450329 467 ntBASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 AC098590.1-201ENST00000468126 897 ntBASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 AC026471.5-201ENST00000615068 467 ntBASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 AC100803.2-201ENST00000562459 1963 ntBASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 BCL2-203ENST00000589955 5011 ntBASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CPPED1Q9BRF8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 AC142381.4-202ENST00000563973 229 ntBASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 AP001412.1-201ENST00000608405 714 ntBASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms