Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PNN-202ENST00000553331 656 ntTSL 3 BASIC19■□□□□ 0.63
SMOQ99835 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19■□□□□ 0.63
SMOQ99835 AC074051.2-201ENST00000565115 352 ntBASIC19■□□□□ 0.63
SMOQ99835 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SMOQ99835 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19■□□□□ 0.63
SMOQ99835 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19■□□□□ 0.63
SMOQ99835 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19■□□□□ 0.63
SMOQ99835 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.99■□□□□ 0.63
SMOQ99835 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.99■□□□□ 0.63
SMOQ99835 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.99■□□□□ 0.63
SMOQ99835 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.99■□□□□ 0.63
SMOQ99835 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SMOQ99835 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
SMOQ99835 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SMOQ99835 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.99■□□□□ 0.63
SMOQ99835 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.99■□□□□ 0.63
SMOQ99835 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.99■□□□□ 0.63
SMOQ99835 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.99■□□□□ 0.63
SMOQ99835 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.99■□□□□ 0.63
SMOQ99835 AC005336.2-201ENST00000593183 939 ntBASIC18.99■□□□□ 0.63
SMOQ99835 Z69720.1-201ENST00000601483 472 ntBASIC18.99■□□□□ 0.63
SMOQ99835 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.99■□□□□ 0.63
SMOQ99835 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.99■□□□□ 0.63
SMOQ99835 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.99■□□□□ 0.63
SMOQ99835 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SMOQ99835 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.99■□□□□ 0.63
SMOQ99835 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.99■□□□□ 0.63
SMOQ99835 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.99■□□□□ 0.63
SMOQ99835 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SMOQ99835 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMOQ99835 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.99■□□□□ 0.63
SMOQ99835 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 REXO1L9P-201ENST00000604264 2108 ntBASIC18.98■□□□□ 0.63
SMOQ99835 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMOQ99835 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.98■□□□□ 0.63
SMOQ99835 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SMOQ99835 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.98■□□□□ 0.63
SMOQ99835 AC104819.1-201ENST00000504587 486 ntBASIC18.98■□□□□ 0.63
SMOQ99835 AC112698.1-201ENST00000510299 916 ntBASIC18.98■□□□□ 0.63
SMOQ99835 DUTP2-201ENST00000519164 463 ntBASIC18.98■□□□□ 0.63
SMOQ99835 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.98■□□□□ 0.63
SMOQ99835 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.98■□□□□ 0.63
SMOQ99835 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMOQ99835 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMOQ99835 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.98■□□□□ 0.63
SMOQ99835 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMOQ99835 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.97■□□□□ 0.63
SMOQ99835 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 BICD1-207ENST00000551848 1962 ntBASIC18.97■□□□□ 0.63
SMOQ99835 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.97■□□□□ 0.63
SMOQ99835 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SMOQ99835 NSUN5P1-202ENST00000421140 1535 ntBASIC18.97■□□□□ 0.63
SMOQ99835 NSUN5P2-203ENST00000457352 1529 ntBASIC18.97■□□□□ 0.63
SMOQ99835 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SMOQ99835 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SMOQ99835 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SMOQ99835 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SMOQ99835 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SMOQ99835 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.97■□□□□ 0.63
SMOQ99835 NUS1P1-201ENST00000446295 882 ntBASIC18.97■□□□□ 0.63
SMOQ99835 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SMOQ99835 VENTXP7-201ENST00000475503 772 ntBASIC18.97■□□□□ 0.63
SMOQ99835 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.97■□□□□ 0.63
SMOQ99835 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms