Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 AC008622.2-201ENST00000617006 1229 ntBASIC16.43■□□□□ 0.22
SHFQ7M4L6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SHFQ7M4L6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHFQ7M4L6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 AP000593.1-201ENST00000393668 712 ntBASIC16.42■□□□□ 0.22
SHFQ7M4L6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHFQ7M4L6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.42■□□□□ 0.22
SHFQ7M4L6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.41■□□□□ 0.22
SHFQ7M4L6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 SIRPAP1-201ENST00000448467 1770 ntBASIC16.41■□□□□ 0.22
SHFQ7M4L6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 FAM201B-201ENST00000458407 597 ntBASIC16.41■□□□□ 0.22
SHFQ7M4L6 MIR4651-201ENST00000582622 73 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms