Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 ECEL1P3-201ENST00000427961 737 ntBASIC16.54■□□□□ 0.24
NIPAL3Q6P499 ATP5G1P1-201ENST00000448724 379 ntBASIC16.54■□□□□ 0.24
NIPAL3Q6P499 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 WWOX-216ENST00000569818 525 ntBASIC16.54■□□□□ 0.24
NIPAL3Q6P499 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 AC012306.2-201ENST00000609350 630 ntBASIC16.54■□□□□ 0.24
NIPAL3Q6P499 AC034236.2-201ENST00000606662 1610 ntBASIC16.54■□□□□ 0.24
NIPAL3Q6P499 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NIPAL3Q6P499 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 AL096828.2-201ENST00000567259 1965 ntBASIC16.53■□□□□ 0.24
NIPAL3Q6P499 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 AP000593.1-201ENST00000393668 712 ntBASIC16.53■□□□□ 0.24
NIPAL3Q6P499 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL3Q6P499 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms