Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 AC022898.2-201ENST00000616822 1312 ntBASIC18.85■□□□□ 0.61
LRRC38Q5VT99 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC38Q5VT99 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 AC087499.1-201ENST00000418141 1075 ntBASIC18.84■□□□□ 0.61
LRRC38Q5VT99 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 AC034232.1-201ENST00000506026 1064 ntBASIC18.84■□□□□ 0.61
LRRC38Q5VT99 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC38Q5VT99 KRT89P-201ENST00000620027 1478 ntBASIC18.84■□□□□ 0.61
LRRC38Q5VT99 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.83■□□□□ 0.61
LRRC38Q5VT99 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC38Q5VT99 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC38Q5VT99 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.83■□□□□ 0.61
LRRC38Q5VT99 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.83■□□□□ 0.61
LRRC38Q5VT99 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 GCSHP2-201ENST00000560971 527 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms