Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB3P54753 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
EPHB3P54753 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB3P54753 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.92■□□□□ 0.62
EPHB3P54753 AL022342.1-201ENST00000400363 863 ntBASIC18.92■□□□□ 0.62
EPHB3P54753 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB3P54753 AP000347.1-202ENST00000435868 847 ntBASIC18.92■□□□□ 0.62
EPHB3P54753 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.92■□□□□ 0.62
EPHB3P54753 AC112698.1-201ENST00000510299 916 ntBASIC18.92■□□□□ 0.62
EPHB3P54753 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHB3P54753 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
EPHB3P54753 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.92■□□□□ 0.62
EPHB3P54753 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.92■□□□□ 0.62
EPHB3P54753 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.92■□□□□ 0.62
EPHB3P54753 TP73-AS1-207ENST00000624167 988 ntBASIC18.92■□□□□ 0.62
EPHB3P54753 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
EPHB3P54753 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB3P54753 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHB3P54753 SLC25A24-204ENST00000569674 2357 ntBASIC18.92■□□□□ 0.62
EPHB3P54753 HLA-A-201ENST00000376802 1334 ntBASIC18.92■□□□□ 0.62
EPHB3P54753 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB3P54753 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
EPHB3P54753 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHB3P54753 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHB3P54753 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHB3P54753 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
EPHB3P54753 AL031598.1-201ENST00000561511 1773 ntBASIC18.91■□□□□ 0.62
EPHB3P54753 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB3P54753 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EPHB3P54753 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB3P54753 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
EPHB3P54753 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB3P54753 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.91■□□□□ 0.62
EPHB3P54753 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
EPHB3P54753 AF186996.4-201ENST00000467186 377 ntBASIC18.91■□□□□ 0.62
EPHB3P54753 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.91■□□□□ 0.62
EPHB3P54753 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.91■□□□□ 0.62
EPHB3P54753 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.91■□□□□ 0.62
EPHB3P54753 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.91■□□□□ 0.62
EPHB3P54753 AC011467.2-201ENST00000598425 242 ntBASIC18.91■□□□□ 0.62
EPHB3P54753 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.91■□□□□ 0.62
EPHB3P54753 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB3P54753 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB3P54753 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB3P54753 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EPHB3P54753 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB3P54753 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EPHB3P54753 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EPHB3P54753 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB3P54753 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB3P54753 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
EPHB3P54753 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
EPHB3P54753 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHB3P54753 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.9■□□□□ 0.62
EPHB3P54753 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHB3P54753 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.9■□□□□ 0.62
EPHB3P54753 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.9■□□□□ 0.62
EPHB3P54753 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
EPHB3P54753 AP001005.1-201ENST00000571755 1248 ntBASIC18.9■□□□□ 0.62
EPHB3P54753 AL773604.1-201ENST00000617417 272 ntBASIC18.9■□□□□ 0.62
EPHB3P54753 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHB3P54753 AL355877.3-201ENST00000622820 899 ntBASIC18.9■□□□□ 0.62
EPHB3P54753 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHB3P54753 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
EPHB3P54753 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
EPHB3P54753 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHB3P54753 INTS4P1-201ENST00000438455 1935 ntBASIC18.9■□□□□ 0.62
EPHB3P54753 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
EPHB3P54753 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB3P54753 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHB3P54753 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
EPHB3P54753 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.89■□□□□ 0.62
EPHB3P54753 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
EPHB3P54753 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
EPHB3P54753 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
EPHB3P54753 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
EPHB3P54753 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB3P54753 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB3P54753 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB3P54753 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.89■□□□□ 0.61
EPHB3P54753 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB3P54753 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.89■□□□□ 0.61
EPHB3P54753 RBM17P3-201ENST00000417687 1192 ntBASIC18.89■□□□□ 0.61
EPHB3P54753 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB3P54753 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.89■□□□□ 0.61
EPHB3P54753 KRT18P67-201ENST00000432816 1264 ntBASIC18.89■□□□□ 0.61
EPHB3P54753 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms