Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
ATXN3P54252 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATXN3P54252 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
ATXN3P54252 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATXN3P54252 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.54■□□□□ 0.56
ATXN3P54252 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATXN3P54252 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.54■□□□□ 0.56
ATXN3P54252 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATXN3P54252 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.54■□□□□ 0.56
ATXN3P54252 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATXN3P54252 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.54■□□□□ 0.56
ATXN3P54252 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATXN3P54252 GPAT2P1-201ENST00000444924 1672 ntBASIC18.54■□□□□ 0.56
ATXN3P54252 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.53■□□□□ 0.56
ATXN3P54252 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.53■□□□□ 0.56
ATXN3P54252 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATXN3P54252 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.53■□□□□ 0.56
ATXN3P54252 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 MCCD1P1-208ENST00000445732 328 ntBASIC18.53■□□□□ 0.56
ATXN3P54252 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 AC009078.2-202ENST00000463353 338 ntBASIC18.53■□□□□ 0.56
ATXN3P54252 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.53■□□□□ 0.56
ATXN3P54252 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
ATXN3P54252 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATXN3P54252 AL732292.2-201ENST00000609649 430 ntBASIC18.53■□□□□ 0.56
ATXN3P54252 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.53■□□□□ 0.56
ATXN3P54252 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.53■□□□□ 0.56
ATXN3P54252 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.53■□□□□ 0.56
ATXN3P54252 TEX21P-204ENST00000641479 1693 ntBASIC18.53■□□□□ 0.56
ATXN3P54252 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATXN3P54252 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.52■□□□□ 0.56
ATXN3P54252 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ATXN3P54252 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ATXN3P54252 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.52■□□□□ 0.56
ATXN3P54252 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.52■□□□□ 0.56
ATXN3P54252 AC079776.4-201ENST00000511039 504 ntBASIC18.52■□□□□ 0.56
ATXN3P54252 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.52■□□□□ 0.56
ATXN3P54252 AL160237.2-201ENST00000556165 472 ntBASIC18.52■□□□□ 0.56
ATXN3P54252 MIR3180-5-201ENST00000583743 153 ntBASIC18.52■□□□□ 0.56
ATXN3P54252 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.52■□□□□ 0.56
ATXN3P54252 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.52■□□□□ 0.56
ATXN3P54252 AL136038.4-201ENST00000603606 1261 ntBASIC18.52■□□□□ 0.56
ATXN3P54252 AC023511.2-201ENST00000618803 211 ntBASIC18.52■□□□□ 0.56
ATXN3P54252 AL031008.1-201ENST00000619963 541 ntBASIC18.52■□□□□ 0.56
ATXN3P54252 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.52■□□□□ 0.56
ATXN3P54252 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3P54252 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ATXN3P54252 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.52■□□□□ 0.56
ATXN3P54252 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
ATXN3P54252 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
ATXN3P54252 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.52■□□□□ 0.55
ATXN3P54252 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATXN3P54252 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.52■□□□□ 0.55
ATXN3P54252 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATXN3P54252 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATXN3P54252 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ATXN3P54252 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.51■□□□□ 0.55
ATXN3P54252 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATXN3P54252 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATXN3P54252 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.51■□□□□ 0.55
ATXN3P54252 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ATXN3P54252 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATXN3P54252 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
ATXN3P54252 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.51■□□□□ 0.55
ATXN3P54252 TSPY19P-201ENST00000418461 509 ntBASIC18.51■□□□□ 0.55
ATXN3P54252 TSPY18P-201ENST00000441642 509 ntBASIC18.51■□□□□ 0.55
ATXN3P54252 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms