Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NKX2-1P43699 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX2-1P43699 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.89□□□□□ -0.03
NKX2-1P43699 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.89□□□□□ -0.03
NKX2-1P43699 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NKX2-1P43699 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NKX2-1P43699 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
NKX2-1P43699 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NKX2-1P43699 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX2-1P43699 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NKX2-1P43699 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NKX2-1P43699 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
NKX2-1P43699 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.88□□□□□ -0.03
NKX2-1P43699 GUSBP6-202ENST00000438529 1198 ntBASIC14.88□□□□□ -0.03
NKX2-1P43699 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.88□□□□□ -0.03
NKX2-1P43699 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.88□□□□□ -0.03
NKX2-1P43699 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.88□□□□□ -0.03
NKX2-1P43699 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX2-1P43699 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-1P43699 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NKX2-1P43699 AC022211.2-201ENST00000585075 2527 ntBASIC14.88□□□□□ -0.03
NKX2-1P43699 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-1P43699 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 NKILA-202ENST00000614771 2598 ntBASIC14.87□□□□□ -0.03
NKX2-1P43699 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.87□□□□□ -0.03
NKX2-1P43699 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 AP001094.4-201ENST00000579008 2176 ntBASIC14.87□□□□□ -0.03
NKX2-1P43699 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NKX2-1P43699 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-1P43699 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.87□□□□□ -0.03
NKX2-1P43699 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms