Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP6V1AP38606 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC23.07■■□□□ 1.28
ATP6V1AP38606 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.07■■□□□ 1.28
ATP6V1AP38606 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC23.07■■□□□ 1.28
ATP6V1AP38606 BX005266.1-201ENST00000473402 457 ntBASIC23.07■■□□□ 1.28
ATP6V1AP38606 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.07■■□□□ 1.28
ATP6V1AP38606 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC23.07■■□□□ 1.28
ATP6V1AP38606 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
ATP6V1AP38606 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.07■■□□□ 1.28
ATP6V1AP38606 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.07■■□□□ 1.28
ATP6V1AP38606 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP6V1AP38606 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP6V1AP38606 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V1AP38606 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V1AP38606 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V1AP38606 CRCP-205ENST00000431089 942 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V1AP38606 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V1AP38606 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP6V1AP38606 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V1AP38606 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 SNCG-201ENST00000348795 684 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 AC002347.1-201ENST00000569543 541 ntBASIC23.05■■□□□ 1.28
ATP6V1AP38606 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP6V1AP38606 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V1AP38606 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V1AP38606 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V1AP38606 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V1AP38606 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V1AP38606 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 AC007967.3-201ENST00000434308 558 ntBASIC23.04■■□□□ 1.28
ATP6V1AP38606 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V1AP38606 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V1AP38606 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V1AP38606 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V1AP38606 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V1AP38606 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V1AP38606 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
ATP6V1AP38606 AC005082.1-201ENST00000413042 2259 ntBASIC23.03■■□□□ 1.28
ATP6V1AP38606 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP6V1AP38606 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP6V1AP38606 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP6V1AP38606 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 BEX3-201ENST00000361298 921 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP6V1AP38606 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
ATP6V1AP38606 AC079776.2-201ENST00000641154 1609 ntBASIC23.03■■□□□ 1.28
ATP6V1AP38606 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms