Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.67■□□□□ 0.58
VCANP13611 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.67■□□□□ 0.58
VCANP13611 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.67■□□□□ 0.58
VCANP13611 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.67■□□□□ 0.58
VCANP13611 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
VCANP13611 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.67■□□□□ 0.58
VCANP13611 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VCANP13611 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCANP13611 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.67■□□□□ 0.58
VCANP13611 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
VCANP13611 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VCANP13611 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
VCANP13611 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.67■□□□□ 0.58
VCANP13611 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.67■□□□□ 0.58
VCANP13611 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VCANP13611 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.67■□□□□ 0.58
VCANP13611 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.67■□□□□ 0.58
VCANP13611 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VCANP13611 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.66■□□□□ 0.58
VCANP13611 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.66■□□□□ 0.58
VCANP13611 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.66■□□□□ 0.58
VCANP13611 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.66■□□□□ 0.58
VCANP13611 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.66■□□□□ 0.58
VCANP13611 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VCANP13611 AL357033.4-201ENST00000617703 1807 ntBASIC18.66■□□□□ 0.58
VCANP13611 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.66■□□□□ 0.58
VCANP13611 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.66■□□□□ 0.58
VCANP13611 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.66■□□□□ 0.58
VCANP13611 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VCANP13611 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.66■□□□□ 0.58
VCANP13611 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.66■□□□□ 0.58
VCANP13611 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.66■□□□□ 0.58
VCANP13611 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
VCANP13611 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCANP13611 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
VCANP13611 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
VCANP13611 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCANP13611 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCANP13611 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.65■□□□□ 0.58
VCANP13611 SERBP1P5-201ENST00000510079 1181 ntBASIC18.65■□□□□ 0.58
VCANP13611 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCANP13611 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.65■□□□□ 0.58
VCANP13611 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VCANP13611 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.65■□□□□ 0.58
VCANP13611 AL358472.5-202ENST00000641448 1267 ntBASIC18.65■□□□□ 0.58
VCANP13611 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
VCANP13611 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
VCANP13611 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCANP13611 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VCANP13611 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCANP13611 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.65■□□□□ 0.58
VCANP13611 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.65■□□□□ 0.58
VCANP13611 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCANP13611 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.65■□□□□ 0.58
VCANP13611 BASP1P1-201ENST00000430708 665 ntBASIC18.65■□□□□ 0.58
VCANP13611 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.65■□□□□ 0.58
VCANP13611 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.65■□□□□ 0.58
VCANP13611 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCANP13611 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.65■□□□□ 0.58
VCANP13611 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.65■□□□□ 0.58
VCANP13611 LINC01006-201ENST00000333319 2292 ntBASIC18.65■□□□□ 0.58
VCANP13611 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VCANP13611 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.65■□□□□ 0.58
VCANP13611 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
VCANP13611 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCANP13611 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCANP13611 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.65■□□□□ 0.58
VCANP13611 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.65■□□□□ 0.58
VCANP13611 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
VCANP13611 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCANP13611 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
VCANP13611 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
VCANP13611 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VCANP13611 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VCANP13611 ADH5P3-201ENST00000433842 1137 ntBASIC18.64■□□□□ 0.58
VCANP13611 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VCANP13611 AC068472.1-201ENST00000474589 881 ntBASIC18.64■□□□□ 0.58
VCANP13611 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.64■□□□□ 0.58
VCANP13611 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VCANP13611 AC006557.2-201ENST00000592985 1240 ntBASIC18.64■□□□□ 0.58
VCANP13611 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VCANP13611 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.64■□□□□ 0.57
VCANP13611 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCANP13611 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCANP13611 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.64■□□□□ 0.57
VCANP13611 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VCANP13611 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCANP13611 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.64■□□□□ 0.57
VCANP13611 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms