Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC30.93■■■□□ 2.54
CFTRP13569 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CFTRP13569 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CFTRP13569 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
CFTRP13569 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CFTRP13569 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC30.92■■■□□ 2.54
CFTRP13569 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CFTRP13569 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC30.92■■■□□ 2.54
CFTRP13569 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
CFTRP13569 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC30.92■■■□□ 2.54
CFTRP13569 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
CFTRP13569 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC30.92■■■□□ 2.54
CFTRP13569 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CFTRP13569 AL353593.2-201ENST00000602529 1483 ntBASIC30.92■■■□□ 2.54
CFTRP13569 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CFTRP13569 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CFTRP13569 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
CFTRP13569 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CFTRP13569 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC30.91■■■□□ 2.54
CFTRP13569 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
CFTRP13569 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC30.91■■■□□ 2.54
CFTRP13569 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC30.91■■■□□ 2.54
CFTRP13569 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC30.91■■■□□ 2.54
CFTRP13569 AL096865.1-201ENST00000606796 927 ntBASIC30.91■■■□□ 2.54
CFTRP13569 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC30.91■■■□□ 2.54
CFTRP13569 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC30.91■■■□□ 2.54
CFTRP13569 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CFTRP13569 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC30.91■■■□□ 2.54
CFTRP13569 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CFTRP13569 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC30.9■■■□□ 2.54
CFTRP13569 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
CFTRP13569 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
CFTRP13569 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC30.9■■■□□ 2.54
CFTRP13569 AC073592.5-201ENST00000624854 528 ntBASIC30.9■■■□□ 2.54
CFTRP13569 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC30.9■■■□□ 2.54
CFTRP13569 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
CFTRP13569 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC30.9■■■□□ 2.54
CFTRP13569 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CFTRP13569 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC30.89■■■□□ 2.54
CFTRP13569 COX20P2-201ENST00000452636 358 ntBASIC30.89■■■□□ 2.54
CFTRP13569 RPS15P9-201ENST00000494093 319 ntBASIC30.89■■■□□ 2.54
CFTRP13569 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC30.89■■■□□ 2.54
CFTRP13569 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC30.89■■■□□ 2.54
CFTRP13569 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC30.89■■■□□ 2.54
CFTRP13569 AC010654.1-201ENST00000615722 808 ntBASIC30.89■■■□□ 2.54
CFTRP13569 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC30.89■■■□□ 2.54
CFTRP13569 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CFTRP13569 GOLGA6L17P-202ENST00000614358 1398 ntBASIC30.89■■■□□ 2.54
CFTRP13569 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC30.89■■■□□ 2.54
CFTRP13569 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CFTRP13569 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC30.89■■■□□ 2.54
CFTRP13569 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
CFTRP13569 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CFTRP13569 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
CFTRP13569 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CFTRP13569 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CFTRP13569 WDR53-203ENST00000429115 683 ntTSL 2 BASIC30.89■■■□□ 2.53
CFTRP13569 CEND1P1-201ENST00000451006 455 ntBASIC30.89■■■□□ 2.53
CFTRP13569 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC30.89■■■□□ 2.53
CFTRP13569 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC30.89■■■□□ 2.53
CFTRP13569 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC30.89■■■□□ 2.53
CFTRP13569 AL805961.1-202ENST00000641562 540 ntBASIC30.89■■■□□ 2.53
CFTRP13569 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
CFTRP13569 NCF1C-201ENST00000438382 1427 ntBASIC30.88■■■□□ 2.53
CFTRP13569 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CFTRP13569 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
CFTRP13569 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
CFTRP13569 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
CFTRP13569 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC30.88■■■□□ 2.53
CFTRP13569 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
CFTRP13569 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC30.88■■■□□ 2.53
CFTRP13569 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC30.88■■■□□ 2.53
CFTRP13569 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
CFTRP13569 AC239800.4-201ENST00000603712 296 ntBASIC30.88■■■□□ 2.53
CFTRP13569 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC30.87■■■□□ 2.53
CFTRP13569 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
CFTRP13569 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CFTRP13569 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CFTRP13569 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CFTRP13569 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CFTRP13569 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC30.87■■■□□ 2.53
CFTRP13569 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
CFTRP13569 PRR29-209ENST00000582540 967 ntTSL 2 BASIC30.87■■■□□ 2.53
CFTRP13569 CITED2-204ENST00000618718 901 ntTSL 2 BASIC30.87■■■□□ 2.53
CFTRP13569 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CFTRP13569 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CFTRP13569 TBC1D3P5-201ENST00000579401 1545 ntBASIC30.87■■■□□ 2.53
CFTRP13569 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CFTRP13569 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
CFTRP13569 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CFTRP13569 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
CFTRP13569 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
CFTRP13569 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CFTRP13569 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC30.86■■■□□ 2.53
CFTRP13569 AL049812.1-201ENST00000432563 2267 ntBASIC30.86■■■□□ 2.53
CFTRP13569 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CFTRP13569 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CFTRP13569 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CFTRP13569 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
CFTRP13569 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms