Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH1P12830 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CDH1P12830 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH1P12830 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH1P12830 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH1P12830 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH1P12830 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH1P12830 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH1P12830 MIR3917-201ENST00000580971 93 ntBASIC17.72■□□□□ 0.43
CDH1P12830 MIR3180-4-201ENST00000582223 153 ntBASIC17.72■□□□□ 0.43
CDH1P12830 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH1P12830 AL157888.1-201ENST00000631930 593 ntBASIC17.72■□□□□ 0.43
CDH1P12830 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH1P12830 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH1P12830 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDH1P12830 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDH1P12830 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH1P12830 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH1P12830 ESPNP-201ENST00000270691 2015 ntBASIC17.71■□□□□ 0.43
CDH1P12830 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH1P12830 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH1P12830 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDH1P12830 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH1P12830 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH1P12830 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH1P12830 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH1P12830 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDH1P12830 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDH1P12830 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH1P12830 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH1P12830 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH1P12830 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH1P12830 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDH1P12830 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH1P12830 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDH1P12830 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH1P12830 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDH1P12830 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDH1P12830 KRT18P21-201ENST00000515767 1272 ntBASIC17.7■□□□□ 0.42
CDH1P12830 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH1P12830 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CDH1P12830 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH1P12830 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH1P12830 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH1P12830 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH1P12830 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CDH1P12830 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH1P12830 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH1P12830 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDH1P12830 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH1P12830 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH1P12830 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH1P12830 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH1P12830 BCL2-203ENST00000589955 5011 ntBASIC17.69■□□□□ 0.42
CDH1P12830 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH1P12830 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH1P12830 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH1P12830 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH1P12830 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH1P12830 AK4P3-201ENST00000418260 669 ntBASIC17.69■□□□□ 0.42
CDH1P12830 TMPOP1-202ENST00000424642 1267 ntBASIC17.69■□□□□ 0.42
CDH1P12830 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH1P12830 AC104076.2-201ENST00000448912 469 ntBASIC17.69■□□□□ 0.42
CDH1P12830 AC034232.1-201ENST00000506026 1064 ntBASIC17.69■□□□□ 0.42
CDH1P12830 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CDH1P12830 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH1P12830 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH1P12830 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.69■□□□□ 0.42
CDH1P12830 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH1P12830 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH1P12830 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH1P12830 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH1P12830 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH1P12830 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH1P12830 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH1P12830 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH1P12830 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms