Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.76■□□□□ 0.59
RHOP08100 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.76■□□□□ 0.59
RHOP08100 TERC-201ENST00000602385 541 ntBASIC18.76■□□□□ 0.59
RHOP08100 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOP08100 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RHOP08100 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RHOP08100 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOP08100 SLC25A24-204ENST00000569674 2357 ntBASIC18.76■□□□□ 0.59
RHOP08100 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOP08100 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RHOP08100 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RHOP08100 PMS2P7-201ENST00000506558 1336 ntBASIC18.75■□□□□ 0.59
RHOP08100 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RHOP08100 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RHOP08100 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RHOP08100 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RHOP08100 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RHOP08100 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.75■□□□□ 0.59
RHOP08100 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RHOP08100 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RHOP08100 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RHOP08100 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.75■□□□□ 0.59
RHOP08100 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RHOP08100 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.75■□□□□ 0.59
RHOP08100 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.75■□□□□ 0.59
RHOP08100 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.75■□□□□ 0.59
RHOP08100 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.75■□□□□ 0.59
RHOP08100 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RHOP08100 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.75■□□□□ 0.59
RHOP08100 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.75■□□□□ 0.59
RHOP08100 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RHOP08100 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RHOP08100 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RHOP08100 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
RHOP08100 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.74■□□□□ 0.59
RHOP08100 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.74■□□□□ 0.59
RHOP08100 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
RHOP08100 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 GMCL1P1-201ENST00000463439 1581 ntBASIC18.74■□□□□ 0.59
RHOP08100 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.74■□□□□ 0.59
RHOP08100 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.74■□□□□ 0.59
RHOP08100 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RHOP08100 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RHOP08100 AC092865.5-201ENST00000545435 363 ntBASIC18.74■□□□□ 0.59
RHOP08100 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.74■□□□□ 0.59
RHOP08100 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.74■□□□□ 0.59
RHOP08100 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.74■□□□□ 0.59
RHOP08100 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RHOP08100 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.74■□□□□ 0.59
RHOP08100 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RHOP08100 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RHOP08100 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RHOP08100 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.73■□□□□ 0.59
RHOP08100 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RHOP08100 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RHOP08100 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RHOP08100 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.73■□□□□ 0.59
RHOP08100 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RHOP08100 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.73■□□□□ 0.59
RHOP08100 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.73■□□□□ 0.59
RHOP08100 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.73■□□□□ 0.59
RHOP08100 IGHV3-22-201ENST00000520721 359 ntBASIC18.73■□□□□ 0.59
RHOP08100 OR7E14P-202ENST00000530490 1290 ntBASIC18.73■□□□□ 0.59
RHOP08100 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.73■□□□□ 0.59
RHOP08100 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.73■□□□□ 0.59
RHOP08100 AL139288.1-201ENST00000623748 933 ntBASIC18.73■□□□□ 0.59
RHOP08100 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.73■□□□□ 0.59
RHOP08100 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.73■□□□□ 0.59
RHOP08100 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RHOP08100 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
RHOP08100 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RHOP08100 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.73■□□□□ 0.59
RHOP08100 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RHOP08100 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.73■□□□□ 0.59
RHOP08100 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RHOP08100 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.72■□□□□ 0.59
RHOP08100 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RHOP08100 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 HLA-J-201ENST00000462773 1622 ntBASIC18.72■□□□□ 0.59
RHOP08100 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.72■□□□□ 0.59
RHOP08100 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms