Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC098831.1-202ENST00000438821 336 ntBASIC21.1■□□□□ 0.97
COL2A1P02458 RPL13AP23-201ENST00000480739 586 ntBASIC21.1■□□□□ 0.97
COL2A1P02458 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.1■□□□□ 0.97
COL2A1P02458 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.1■□□□□ 0.97
COL2A1P02458 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL2A1P02458 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL2A1P02458 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
COL2A1P02458 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL2A1P02458 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL2A1P02458 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.1■□□□□ 0.97
COL2A1P02458 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL2A1P02458 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL2A1P02458 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.09■□□□□ 0.97
COL2A1P02458 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.09■□□□□ 0.97
COL2A1P02458 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.09■□□□□ 0.97
COL2A1P02458 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
COL2A1P02458 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.09■□□□□ 0.97
COL2A1P02458 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COL2A1P02458 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.09■□□□□ 0.97
COL2A1P02458 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.09■□□□□ 0.97
COL2A1P02458 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.09■□□□□ 0.97
COL2A1P02458 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.09■□□□□ 0.97
COL2A1P02458 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COL2A1P02458 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
COL2A1P02458 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COL2A1P02458 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
COL2A1P02458 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.09■□□□□ 0.97
COL2A1P02458 AC022898.2-201ENST00000616822 1312 ntBASIC21.09■□□□□ 0.97
COL2A1P02458 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL2A1P02458 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL2A1P02458 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL2A1P02458 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.08■□□□□ 0.97
COL2A1P02458 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL2A1P02458 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
COL2A1P02458 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.08■□□□□ 0.97
COL2A1P02458 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.08■□□□□ 0.97
COL2A1P02458 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL2A1P02458 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL2A1P02458 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.08■□□□□ 0.97
COL2A1P02458 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.08■□□□□ 0.97
COL2A1P02458 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.08■□□□□ 0.97
COL2A1P02458 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL2A1P02458 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL2A1P02458 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL2A1P02458 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.08■□□□□ 0.96
COL2A1P02458 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL2A1P02458 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL2A1P02458 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.07■□□□□ 0.96
COL2A1P02458 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL2A1P02458 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL2A1P02458 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COL2A1P02458 KRT18P27-201ENST00000427733 1299 ntBASIC21.07■□□□□ 0.96
COL2A1P02458 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
COL2A1P02458 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.07■□□□□ 0.96
COL2A1P02458 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.07■□□□□ 0.96
COL2A1P02458 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.07■□□□□ 0.96
COL2A1P02458 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.07■□□□□ 0.96
COL2A1P02458 AC034105.1-201ENST00000563488 319 ntBASIC21.07■□□□□ 0.96
COL2A1P02458 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COL2A1P02458 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL2A1P02458 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL2A1P02458 ZNF259P1-201ENST00000407656 1365 ntBASIC21.07■□□□□ 0.96
COL2A1P02458 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL2A1P02458 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL2A1P02458 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.07■□□□□ 0.96
COL2A1P02458 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL2A1P02458 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL2A1P02458 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.07■□□□□ 0.96
COL2A1P02458 SPDYE21P-201ENST00000413323 827 ntBASIC21.07■□□□□ 0.96
COL2A1P02458 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL2A1P02458 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.07■□□□□ 0.96
COL2A1P02458 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
COL2A1P02458 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.07■□□□□ 0.96
COL2A1P02458 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL2A1P02458 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
COL2A1P02458 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
COL2A1P02458 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COL2A1P02458 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.06■□□□□ 0.96
COL2A1P02458 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
COL2A1P02458 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 PGAM5P1-201ENST00000518923 814 ntBASIC21.06■□□□□ 0.96
COL2A1P02458 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms