Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHD2O14647 STOM-202ENST00000347359 870 ntTSL 2 BASIC25.1■■□□□ 1.61
CHD2O14647 SNCG-201ENST00000348795 684 ntTSL 2 BASIC25.1■■□□□ 1.61
CHD2O14647 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD2O14647 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
CHD2O14647 CEND1P1-201ENST00000451006 455 ntBASIC25.1■■□□□ 1.61
CHD2O14647 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC25.1■■□□□ 1.61
CHD2O14647 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC25.1■■□□□ 1.61
CHD2O14647 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC25.1■■□□□ 1.61
CHD2O14647 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
CHD2O14647 AC132938.6-201ENST00000623828 1655 ntBASIC25.1■■□□□ 1.61
CHD2O14647 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC25.1■■□□□ 1.61
CHD2O14647 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD2O14647 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD2O14647 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC25.1■■□□□ 1.61
CHD2O14647 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHD2O14647 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHD2O14647 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHD2O14647 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHD2O14647 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD2O14647 POLD4-207ENST00000531239 584 ntTSL 2 BASIC25.09■■□□□ 1.61
CHD2O14647 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC25.09■■□□□ 1.61
CHD2O14647 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.09■■□□□ 1.61
CHD2O14647 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD2O14647 AL499627.1-201ENST00000569373 2188 ntBASIC25.09■■□□□ 1.61
CHD2O14647 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC25.09■■□□□ 1.61
CHD2O14647 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC25.09■■□□□ 1.61
CHD2O14647 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD2O14647 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD2O14647 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHD2O14647 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC25.09■■□□□ 1.61
CHD2O14647 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC25.09■■□□□ 1.61
CHD2O14647 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD2O14647 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC25.09■■□□□ 1.61
CHD2O14647 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD2O14647 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD2O14647 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.09■■□□□ 1.61
CHD2O14647 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
CHD2O14647 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC25.08■■□□□ 1.61
CHD2O14647 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC25.08■■□□□ 1.61
CHD2O14647 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CHD2O14647 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC25.08■■□□□ 1.61
CHD2O14647 METTL26-205ENST00000397666 726 ntTSL 2 BASIC25.08■■□□□ 1.61
CHD2O14647 CBR1-202ENST00000399191 838 ntTSL 3 BASIC25.08■■□□□ 1.61
CHD2O14647 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC25.08■■□□□ 1.61
CHD2O14647 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC25.08■■□□□ 1.61
CHD2O14647 AL353593.2-201ENST00000602529 1483 ntBASIC25.08■■□□□ 1.61
CHD2O14647 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC25.08■■□□□ 1.61
CHD2O14647 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHD2O14647 AL158211.5-201ENST00000623583 2518 ntBASIC25.08■■□□□ 1.61
CHD2O14647 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CHD2O14647 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CHD2O14647 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
CHD2O14647 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
CHD2O14647 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD2O14647 KLK8-202ENST00000320838 456 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD2O14647 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC25.07■■□□□ 1.6
CHD2O14647 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD2O14647 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD2O14647 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC25.07■■□□□ 1.6
CHD2O14647 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC25.07■■□□□ 1.6
CHD2O14647 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD2O14647 METTL23-205ENST00000588302 925 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD2O14647 AC005498.2-205ENST00000593218 784 ntBASIC25.07■■□□□ 1.6
CHD2O14647 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC25.07■■□□□ 1.6
CHD2O14647 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD2O14647 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD2O14647 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC25.07■■□□□ 1.6
CHD2O14647 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD2O14647 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHD2O14647 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD2O14647 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD2O14647 AL161938.1-201ENST00000569833 2180 ntBASIC25.07■■□□□ 1.6
CHD2O14647 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD2O14647 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD2O14647 RPS15P9-201ENST00000494093 319 ntBASIC25.07■■□□□ 1.6
CHD2O14647 GREM1-201ENST00000560677 623 ntTSL 4 BASIC25.07■■□□□ 1.6
CHD2O14647 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC25.07■■□□□ 1.6
CHD2O14647 AL805961.1-202ENST00000641562 540 ntBASIC25.07■■□□□ 1.6
CHD2O14647 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD2O14647 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD2O14647 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD2O14647 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD2O14647 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHD2O14647 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD2O14647 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
CHD2O14647 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHD2O14647 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC25.06■■□□□ 1.6
CHD2O14647 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
CHD2O14647 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
CHD2O14647 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHD2O14647 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD2O14647 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CHD2O14647 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC25.06■■□□□ 1.6
CHD2O14647 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHD2O14647 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC25.05■■□□□ 1.6
CHD2O14647 HLA-J-203ENST00000494367 1087 ntBASIC25.05■■□□□ 1.6
CHD2O14647 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHD2O14647 IGHV3-65-201ENST00000523210 341 ntBASIC25.05■■□□□ 1.6
CHD2O14647 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms