Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.45■□□□□ 0.7
FOXN3O00409 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 AC005521.1-201ENST00000393351 872 ntBASIC19.45■□□□□ 0.7
FOXN3O00409 RASA4DP-201ENST00000460726 1199 ntBASIC19.45■□□□□ 0.7
FOXN3O00409 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.45■□□□□ 0.7
FOXN3O00409 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
FOXN3O00409 AC139887.4-201ENST00000607877 719 ntBASIC19.45■□□□□ 0.7
FOXN3O00409 AC079602.3-201ENST00000623931 403 ntBASIC19.45■□□□□ 0.7
FOXN3O00409 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXN3O00409 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
FOXN3O00409 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXN3O00409 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN3O00409 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.45■□□□□ 0.7
FOXN3O00409 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
FOXN3O00409 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXN3O00409 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
FOXN3O00409 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FOXN3O00409 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FOXN3O00409 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXN3O00409 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FOXN3O00409 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
FOXN3O00409 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.44■□□□□ 0.7
FOXN3O00409 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.44■□□□□ 0.7
FOXN3O00409 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
FOXN3O00409 AL031432.5-201ENST00000641059 760 ntBASIC19.44■□□□□ 0.7
FOXN3O00409 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
FOXN3O00409 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXN3O00409 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXN3O00409 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
FOXN3O00409 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
FOXN3O00409 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 AC012317.2-201ENST00000623305 2251 ntBASIC19.44■□□□□ 0.7
FOXN3O00409 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXN3O00409 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN3O00409 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXN3O00409 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXN3O00409 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXN3O00409 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
FOXN3O00409 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXN3O00409 BX664615.1-201ENST00000443558 458 ntBASIC19.43■□□□□ 0.7
FOXN3O00409 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXN3O00409 AC034232.1-201ENST00000506026 1064 ntBASIC19.43■□□□□ 0.7
FOXN3O00409 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXN3O00409 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
FOXN3O00409 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXN3O00409 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXN3O00409 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXN3O00409 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXN3O00409 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN3O00409 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXN3O00409 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
FOXN3O00409 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXN3O00409 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN3O00409 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
FOXN3O00409 KRT18P55-202ENST00000578578 1546 ntBASIC19.42■□□□□ 0.7
FOXN3O00409 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FOXN3O00409 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXN3O00409 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN3O00409 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms