Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 AL008721.1-201ENST00000609964 604 ntBASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A6A6NMZ7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 PDPK2P-202ENST00000562415 1191 ntBASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 MIR4745-201ENST00000577608 62 ntBASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A6A6NMZ7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 PMS2P4-201ENST00000412466 1052 ntBASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 AC002472.2-201ENST00000442739 958 ntBASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 RN7SL204P-201ENST00000582831 262 ntBASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 AL353135.1-201ENST00000606729 504 ntBASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 AC009154.2-201ENST00000621177 724 ntBASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 AL022326.1-202ENST00000641533 845 ntBASIC16.28■□□□□ 0.2
COL6A6A6NMZ7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 GK-202ENST00000378941 458 ntTSL 3 BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A6A6NMZ7 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms