Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TSPY16P-201ENST00000449843 468 ntBASIC21■□□□□ 0.95
TMEM88BA6NKF7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21■□□□□ 0.95
TMEM88BA6NKF7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM88BA6NKF7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM88BA6NKF7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TMEM88BA6NKF7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21■□□□□ 0.95
TMEM88BA6NKF7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21■□□□□ 0.95
TMEM88BA6NKF7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21■□□□□ 0.95
TMEM88BA6NKF7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21■□□□□ 0.95
TMEM88BA6NKF7 AC099778.1-201ENST00000568593 1911 ntBASIC21■□□□□ 0.95
TMEM88BA6NKF7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM88BA6NKF7 FP475955.4-201ENST00000623131 1990 ntBASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 AC025580.3-201ENST00000617932 1424 ntBASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 TFAMP1-201ENST00000412727 736 ntBASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 BASP1P1-201ENST00000430708 665 ntBASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 AC022494.1-201ENST00000466044 728 ntBASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TMEM88BA6NKF7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 RHOQP3-201ENST00000437982 621 ntBASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 MIR6752-201ENST00000618442 71 ntBASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM88BA6NKF7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 AL121761.2-201ENST00000598007 1648 ntBASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM88BA6NKF7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 TCF3P1-201ENST00000423021 1937 ntBASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 SDHAP2-201ENST00000455183 2001 ntBASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 MTMR9LP-203ENST00000426597 1545 ntBASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 REXO1L3P-201ENST00000622202 1288 ntBASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TMEM88BA6NKF7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms