Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 DUSP5P1-201ENST00000441325 1139 ntBASIC18.44■□□□□ 0.54
CAPN8A6NHC0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 AL671277.2-201ENST00000458060 996 ntBASIC18.44■□□□□ 0.54
CAPN8A6NHC0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.44■□□□□ 0.54
CAPN8A6NHC0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.44■□□□□ 0.54
CAPN8A6NHC0 HYMAI.1-201ENST00000620949 238 ntBASIC18.44■□□□□ 0.54
CAPN8A6NHC0 AC079602.3-201ENST00000623931 403 ntBASIC18.44■□□□□ 0.54
CAPN8A6NHC0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN8A6NHC0 SDHAP2-201ENST00000455183 2001 ntBASIC18.44■□□□□ 0.54
CAPN8A6NHC0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 AC012313.1-201ENST00000593393 3059 ntBASIC18.43■□□□□ 0.54
CAPN8A6NHC0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 AL136038.4-201ENST00000603606 1261 ntBASIC18.43■□□□□ 0.54
CAPN8A6NHC0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.43■□□□□ 0.54
CAPN8A6NHC0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 AL031133.1-201ENST00000406807 723 ntBASIC18.42■□□□□ 0.54
CAPN8A6NHC0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 AC092597.1-201ENST00000487352 616 ntBASIC18.42■□□□□ 0.54
CAPN8A6NHC0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 AC083849.1-201ENST00000615227 514 ntBASIC18.42■□□□□ 0.54
CAPN8A6NHC0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN8A6NHC0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 AL391807.1-203ENST00000604392 2365 ntBASIC18.41■□□□□ 0.54
CAPN8A6NHC0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 AC099343.3-201ENST00000605834 2503 ntBASIC18.41■□□□□ 0.54
CAPN8A6NHC0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 HBZP1-201ENST00000354915 429 ntBASIC18.41■□□□□ 0.54
CAPN8A6NHC0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 AL121956.5-201ENST00000625261 221 ntBASIC18.41■□□□□ 0.54
CAPN8A6NHC0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms